Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00414 ATGGCGAAAACGACGTCGTTACTCCTTAGCTCTCTTCTCCTCTTTGGAACCCTAGCTCTAATCCAGGCGAAGAAGGATTTGAAAGAAGTCACACACAAGGTTTACTTTGATGTTGAGATTGACGGAGAGCCTGCAGGTCGAATTGTAATGGGCCTTTTCGGAAAGACAGTTCCTAAGACAGCAGAAAACTTTCGAGCTCTTTGCACAGGTGAGAAGGGAACTGGAAAAAGTGGAAAGCCTCTTCATTTCAAAGGTAGCTCATTCCACAGGATCATACCTAGCTTTATGATCCAGGGAGGTGACTTTACACATGGGAATGGAATGGGTGGAGAATCAATTTATGGAGAGAAGTTTGCTGACGAGAACTTTAAGCTAAAGCACACTGGACCAGGACTTTTATCAATGGCAAACGCTGGTCCTGATACCAATGGTTCACAGTTCTTCATTACTACTGTTACAACTAGCTGGTTGGATGGAAAGCATGTTGTTTTCGGAAAGGTGCTTTCTGGAATGGATGTTGTATACAAGATTGAAGCTGAAGGAAAACAAAGTGGCACTCCCAAGAGCAAGGTCACAATTGCTGACAGTGGTGAACTACCTCTATAA 606 0.4373 MAKTTSLLLSSLLLFGTLALIQAKKDLKEVTHKVYFDVEIDGEPAGRIVMGLFGKTVPKTAENFRALCTGEKGTGKSGKPLHFKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGKQSGTPKSKVTIADSGELPL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00414 201 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 19 201 - -
Adu01g00414 201 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-1 19 201 - -
Adu01g00414 201 PIRSF Peptidylpro_ismrse 18 200 IPR024936 GO:0003755
Adu01g00414 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 52 67 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 88 100 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 131 146 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 158 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 159 174 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 CDD cyclophilin_ABH_like 32 197 - -
Adu01g00414 201 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 83 100 IPR020892 GO:0003755|GO:0006457
Adu01g00414 201 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 36 196 IPR002130 GO:0000413|GO:0003755
Adu01g00414 201 Gene3D - 20 200 IPR029000 -
Adu01g00414 201 SUPERFAMILY Cyclophilin-like 29 199 IPR029000 -
Adu01g00414 201 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 198 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00414 Adu-Chr1 5458124 5460908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00414 46 178 U-box Gene Family AT5G67530 46.269 2.27e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00414 K01802 - gmx:100792140 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00414 01 5458124 5460908 Adu01g00414 01 5458124 5460908 ECH