Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00403 ATGAAACATTTCCATGGATCTAAGAAAGATACAATCCTTGGAGAGCTATATAAATCTTACTCTGAGTTATGCAAATCATCACTGATTCCCCCAACAGGAATCTTGGAATTCTCAAACATGTGCAGAGTGCTTAATGACCAGGGGCTAATTAAACTAGGACCATCACGAGAGGATAAATTGAAAAGGGTAACACTAAAAGTTAACAAGGCTGATATTACTTTTGCATTGCAGATAACAGATTATTTCATTATATATGAAATTGCTTGGGAGTTGGGAAGAATTTTCAGCTGA 291 0.3574 MKHFHGSKKDTILGELYKSYSELCKSSLIPPTGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTLKVNKADITFALQITDYFIIYEIAWELGRIFS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00403 96 SMART Cdc6_C_2 1 76 IPR015163 -
Adu01g00403 96 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 2 77 - -
Adu01g00403 96 SUPERFAMILY "Winged helix" DNA-binding domain 7 77 IPR036390 -
Adu01g00403 96 Gene3D - 1 83 IPR036388 -
Adu01g00403 96 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 2 77 - -
Adu01g00403 96 Pfam CDC6, C terminal winged helix domain 5 75 IPR015163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00403 Adu-Chr1 5293902 5294728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00403 2 82 Core DNA Replication Machinery Family AT2G29680 62.963 1.01e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00403 K02213 - adu:107471820 158.303