Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00395 ATGAACGTTCCTCGTCGGAACTTGCCCGGATCATTGGTCCGACCCGAATCTGAAATCTCCGGCGAGTTGGACAGCGGCCTCTTCTTCCCTCTCCGGAATGATATATTCCCCTGCACCGCGTGCGGCGAGATCTTCCAGAAGCCGCTCCTACTGGAGCAGCATCAATCTACGAAGCACGCGGTGTCGGAGCTACCCGGATCCGACCCCGGTCACAACATAGTCCAGATCATATTCAAGTCGGGTTGGCCCGAGATCCGAAAGTTCCCGATCATAACCCGGATCCTTAAGATCCATAACAGCCAAAAGATTCTCTCGCGGTTCGAGGAGTATCGCGAGGCTGTCAAGGAGAGGGCCGCGCTTCACGGCGGCATAATGTCCACGCGCCGCCGTGACGAGCGGTGCCTCGCCGATGGCAATGAGCTTATGAGGGTTTTCCCCGAAATTAGATGGAATTTCCACCGAGCCATGCTGGTTTGTAGAGTTATTGCGGGTCGGGTCGGATCGGATTCAGACGAAGCTGAAAAGGAGGATGGTGGGAGTTTCGACTCCGTGATGGCACGTGGCGGTGACAGCGGAGTGTACACTCGGCTAGACGAGGAGGAGCTTTTGGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTGTGA 663 0.5535 MNVPRRNLPGSLVRPESEISGELDSGLFFPLRNDIFPCTACGEIFQKPLLLEQHQSTKHAVSELPGSDPGHNIVQIIFKSGWPEIRKFPIITRILKIHNSQKILSRFEEYREAVKERAALHGGIMSTRRRDERCLADGNELMRVFPEIRWNFHRAMLVCRVIAGRVGSDSDEAEKEDGGSFDSVMARGGDSGVYTRLDEEELLVFNPRAVLPCFVIVYSV 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00395 220 Gene3D - 145 220 - -
Adu01g00395 220 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 15 143 - -
Adu01g00395 220 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 150 219 - -
Adu01g00395 220 PANTHER NUCLEIC ACID BINDING PROTEIN 15 143 - -
Adu01g00395 220 PANTHER NUCLEIC ACID BINDING PROTEIN 150 219 - -
Adu01g00395 220 SUPERFAMILY ADP-ribosylation 61 219 - -
Adu01g00395 220 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Adu01g00395 220 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 64 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00395 Adu-Chr1 5163678 5164514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00395 151 220 C2H2 Transcription Factor Family AT2G29660 56.757 4.22e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu01g00395 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00395 - - aip:107608029 291.582