Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00357 ATGAATTCTAACGACGTAGAGAATCACGAGAACAGCAACGTTGCCATAGAACAAAGGAAGATCAACAAAGAGGAGGGGAGAGGCGAATCACCCTCAATTTCCTCGTTCGTGTGCGAAATCTGCATTGACACTAAAATCGAAGCGGAAAATTTCTCTATAACCGGTTGCAGCCACTCATATTGTACGGATTGCGTGGTGAATTACGTTGGTTCTAAGCTTGACGACAACGTGATTAATATCCAGTGTCCGGTACCCCGCTGTGGTGGTTTCTTGGAACTCGACGGTTGCCGCGAGGTTCTGCCAAAGATGATTTTCGATCGGTGGGATAAGTTATTGTGTGAAGCTGCTGTTGTTGAGAACGAGAGCGAGAGATTCATATATTGTCCCTTCAAGGACTGCTCTGCCCTTATGATCGTCGACGATGATTCACCGACGGAATCAGAATGCCCTAGCTGTAATAGGCAGATCTGCGTCTCGTGCGAGACAGTTTGGCATCATGGGAGCACGTGCGAGGAATTTGGGAGGATAGATAATAAATATAGAGTAGTGATGGAGGTAGCGACCAGGAACTAG 573 0.4695 MNSNDVENHENSNVAIEQRKINKEEGRGESPSISSFVCEICIDTKIEAENFSITGCSHSYCTDCVVNYVGSKLDDNVINIQCPVPRCGGFLELDGCREVLPKMIFDRWDKLLCEAAVVENESERFIYCPFKDCSALMIVDDDSPTESECPSCNRQICVSCETVWHHGSTCEEFGRIDNKYRVVMEVATRN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00357 190 Pfam Zinc finger, C3HC4 type (RING finger) 38 83 IPR018957 GO:0046872
Adu01g00357 190 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 25 183 - -
Adu01g00357 190 SUPERFAMILY RING/U-box 35 115 - -
Adu01g00357 190 SUPERFAMILY RING/U-box 120 173 - -
Adu01g00357 190 ProSitePatterns Zinc finger RING-type signature. 56 65 IPR017907 -
Adu01g00357 190 MobiDBLite consensus disorder prediction 12 27 - -
Adu01g00357 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 118 IPR013083 -
Adu01g00357 190 ProSiteProfiles TRIAD supradomain profile. 34 190 IPR044066 -
Adu01g00357 190 MobiDBLite consensus disorder prediction 1 31 - -
Adu01g00357 190 SMART ibrneu5 106 170 IPR002867 -
Adu01g00357 190 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 25 183 IPR031127 GO:0004842|GO:0016567
Adu01g00357 190 ProSiteProfiles Zinc finger RING-type profile. 38 86 IPR001841 -
Adu01g00357 190 Pfam IBR domain, a half RING-finger domain 107 170 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00357 Adu-Chr1 4635289 4635861 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00357 32 170 ARIADNE family AT3G27710 24.648 7.70e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00357 K11975 - aip:107607785 191.43