Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00338 ATGAATTCTTCGAATGGAAGGCCAACAAACAAGTTTGAGGATCAAGTTCCTTTTAGCCCTGAAATAGCTTATCACCAGCCAGAATCTACTATGGCTGCACGTGGATCACATCCCGGAGAATCGCTCACTGTTTGCAGCGAAACATTGGGGGGCATTATTTACAGGAGCATACGGCTTGTGGTTTTCTCGAACAGACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCGATTCTTGTTCAGAAATTGACTGGTCATCATGGCTGGGTCTTCGGTCTTAGTTTACTGGGGATAATGCCTCTGGCAGAGCGGCTCGGTTATGCCACGGAGCAACTTGCATTTTACACTGGAGATACAGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTAATAATCTCGTTATATGCCCTGAAAAGTGGATTGACACGAGTAGTCCAGCTTTCATTGCTGGGTTCAATTTTGTCAAACATGTTGCTTGTGCTTGGATGTGCATTCTTAAGTGGTGGTATTGTTTTCAGCAAGAAGGAACAAGTATTTAACAAGGCAGCTGCTACGGTGAATTCAGGATTGCTGCTTATGGCAGTTATGGGCCTACTTTTTCCTGCTGTTCTTCATTATACACGAACTGAGGTGCACTTCGGGAAGTCAGAACTGGCGCTTTCAAGATTCAGCAGCTGTGTCATGCTTGTGGCCTATGCTGCATACTTATTTTTCCAGTTGAGAAATCAAAGTGGTCTCTATATCTCTGCGAACGAGGAAGAGAGAGAGACAGGCGACAACTCAAATGACGATGAATCTCCTGAAATTTCTAAATGGGAATCAATAATCTGGCTTTTGGTTATGACTGCTTGGATATCAATTCTTTCCGAATATTTGGTTGGCGCTATAGAGGGAGCATCTAATTCATGGAACATACCAGTAACATTCATTAGTGTCATATTGCTTCCACTGGTGGGGAACGCAGCAGAACATGCTAGTGCTATCATGTTTGCCATGAAAGATAAATTAGACATCTCCTTGGGAGTAGCGATAGGGTCGTCCACGCAGATATCTATGTTCGTTATACCATTTTGTGTTGTTATGGGGTGGATAATGGGGCAACCATTGGACCTGAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTAACTGTTATAGTTGTTGCCTTCATGTTACAGGAAGGAACTGCAAATTACTTCAAGGGGGTAATGCTTGTGCTTTGCTATCTGATAGTAGCAGCTAGTTTTTATGTACATGTAGATTCCAATTCTGAAGACCAGCCTGTTCCCTAA 1302 0.4286 MNSSNGRPTNKFEDQVPFSPEIAYHQPESTMAARGSHPGESLTVCSETLGGIIYRSIRLVVFSNRLNLLMPFGPLAILVQKLTGHHGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISLYALKSGLTRVVQLSLLGSILSNMLLVLGCAFLSGGIVFSKKEQVFNKAAATVNSGLLLMAVMGLLFPAVLHYTRTEVHFGKSELALSRFSSCVMLVAYAAYLFFQLRNQSGLYISANEEERETGDNSNDDESPEISKWESIIWLLVMTAWISILSEYLVGAIEGASNSWNIPVTFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVMGWIMGQPLDLNFQLFETAALFLTVIVVAFMLQEGTANYFKGVMLVLCYLIVAASFYVHVDSNSEDQPVP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00338 433 TIGRFAM caca2: calcium/proton exchanger 58 419 - -
Adu01g00338 433 Gene3D - 115 256 IPR044880 -
Adu01g00338 433 Gene3D - 264 421 IPR044880 -
Adu01g00338 433 Pfam Sodium/calcium exchanger protein 88 243 IPR004837 GO:0016021|GO:0055085
Adu01g00338 433 Pfam Sodium/calcium exchanger protein 277 418 IPR004837 GO:0016021|GO:0055085
Adu01g00338 433 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 4 428 - -
Adu01g00338 433 TIGRFAM cax: calcium/proton exchanger 70 420 IPR004798 GO:0006816|GO:0015369
Adu01g00338 433 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 4 428 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00338 Adu-Chr1 4379817 4384526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00338 19 429 Antiporters AT1G55730 70.316 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00338 K07300 - gmx:100799276 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00338 01 4379817 4384526 Adu01g00338 01 4379817 4384526 ECH