Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00324 ATGGAACAACCGACAACATCGGCGACTGACATGTATAAACAACCATTTGTCATAGGTGTTGCTGGTGGTGCAGCATCAGGCAAGACTGCAGTTTGTGATATGATTATTCAGCAACTTCATGATCAACGAGTTGTATTAGTTAATCAGGATTCTTTTTACCATAACTTGACTGAAGAGGAACTTGCTCGTGTACAGGATTACAACTTTGACCATCCTGCAGATGCTTTTGATACTGAGCTATTGCTATGTGTTATGGACAAGTTGAAGCGTGGTGAGGCAGTAGATATTCCAAAGTACGACTTCAAGAGTTACAAGAGTGATGTGTATCCAAAAAGAAGGGTAAACCCCTCAGATGTTATAATTTTGGAAGGGATCCTTGTTTTCCATGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTCTGGCGAGAAGGATTAGACGAGATACTGGCGAGAAGGGTCGGGATATTGCAGTAGTTCTTGATCAGTATTCGAAATTTGTGAAACCAGCTTTTGATGATTTTATTCTCCCTACAAAGAAGTATGCTGATATCATTATACCGCGTGGGGGAGATAATCATGTAGCCATTGACCTGATTGTACAGCATATCCGCACGAAGCTTGGTCAACATGACCTGTGTAAAATATATTCCAATTTATATGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTGATACGTGATGCTCAGATAACAAAGCACGATTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTTGAACATGGGCTGGGGCATCTGCCATTTACAGAAAAGCAAGTAATCACTCCCACTGGTTCTGTATACACTGGCGTGGACTTTTGTAAGAGATTGTGTGGTGTCTCTGTCATTAGGAGTGGGGAGAGTATGGAGAATGCTTTACGAGCATGCTGTAAAGGTATCAAGATCGGGAAAATTCTAATTCACAGAGAAGGTGACAACGGTCAGCAGCAGCTAATATACGAAAAGCTTCCAAACGATATCTCGGATAGGCACGTTTTACTGTTGGATCCTATCCTTGGCACAGGTAATTCGGCTGTACAAGCGATCTCTTTACTTATAAGAAAGGGTGTACCGGAGTCCAACATTATATTTCTCAACCTGATATCTGCACCTCAAGGTGTTCATGTGGTCTGCAAAAAGTTTCCTAGAATAAAAATAGTGACATCTGAGATTGAGATTGGTTTGAATAAAGATTACCGCGTCATACCGGGCATGGGTGAGTTCGGCGACCGGTACTTCGGAACAGATGATGATGAGCAGTTGGTGGTTCCTTCACAGTAG 1344 0.4182 MEQPTTSATDMYKQPFVIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELARVQDYNFDHPADAFDTELLLCVMDKLKRGEAVDIPKYDFKSYKSDVYPKRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTGEKGRDIAVVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYSNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLIRKGVPESNIIFLNLISAPQGVHVVCKKFPRIKIVTSEIEIGLNKDYRVIPGMGEFGDRYFGTDDDEQLVVPSQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00324 447 CDD UMPK 17 216 IPR000764 -
Adu01g00324 447 Gene3D - 11 219 IPR027417 -
Adu01g00324 447 PRINTS Uridine kinase signature 162 173 - -
Adu01g00324 447 PRINTS Uridine kinase signature 45 56 - -
Adu01g00324 447 PRINTS Uridine kinase signature 91 106 - -
Adu01g00324 447 PRINTS Uridine kinase signature 184 197 - -
Adu01g00324 447 PRINTS Uridine kinase signature 15 32 - -
Adu01g00324 447 PRINTS Uridine kinase signature 148 158 - -
Adu01g00324 447 Pfam Uracil phosphoribosyltransferase 234 436 - -
Adu01g00324 447 TIGRFAM udk: uridine kinase 14 216 IPR000764 -
Adu01g00324 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 209 IPR027417 -
Adu01g00324 447 PANTHER URIDINE KINASE 2 438 - -
Adu01g00324 447 Pfam Phosphoribulokinase / Uridine kinase family 17 204 IPR006083 GO:0005524|GO:0016301
Adu01g00324 447 Gene3D - 220 436 IPR029057 -
Adu01g00324 447 CDD PRTases_typeI 293 409 IPR000836 -
Adu01g00324 447 PANTHER URIDINE KINASE 2 438 - -
Adu01g00324 447 SUPERFAMILY PRTase-like 219 437 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00324 Adu-Chr1 4130592 4135170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00324 1 439 PRT Gene Family AT4G26510 86.788 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00324 K00876 - gmx:100527893 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00324 01 4130592 4135170 Adu07g00127 07 1158070 1162095 PCT