Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00314 ATGGAAGGGCGATGGCATCATCATTTGGTATTACATCCCAAAGTCCATCACTTGCAAGAATCAGCAATTCAGTTTGTTCATCTATCTCCTGGTCCTGGATATCAGGTTCTGCAACAACAAACTACTTCATTCAATTGCCAAAGGCGCGAGACATTTAGGACGCCTCTTACCCTCCGAGTACCGGCTGACAACACTCCAGCATTCTCAATTCTCTTCCGTTCATCGCTTCTGTTTGGCTTATCATCCTCAGAGAGCCCAATTGCTTTACTAGCCTTGGATATTATAGTCCTAGAATCTCCAATATCAATCAAAATAGCCGTTGAAGCAGTAGAGCCATCATCCTGTCTTTTCCAGAATCTAGAAATTGAGAATCAGTCCCTTGATACGGTTCATATGGAGCACGCACTTGATAATGGAGGCATCAATGGTGGTTTCGACAGTGGCACAAGAGAAGTGCGACGACCGAATCTTGAAGTGGATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAGAGTTAGATGATACAGAGGAATTTCAAGGAATGTATCAAGATAAAATTGAGCAAGAAGCTGTGAATTCTGAGGATTTAGGGGAGCATGAATTTCAAGAAATGTTTGATGGGAACGATTTTTCACATGAGGTGGATGAATTATATCGAATAGAAGATATTGAAAATATTTCCATGGTTAATTTTCTGAACATAGGTGCTCATGAGATGGAATGCTTTCATTTTCCTAATCTTCAGATAGCATTTGATTTCTATAACCATTATGCGAAATCTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGCTCTCATGAGGGATTTAGACCAGAGAAATATTATAATATGAAAAACAGAAAAAGGGAGCCAAAATCTGAGACTCGTTGTGGTTGTCTGGCTAGGTTTGTAGTTCGTTTTGTAGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCACAATCATGATTGCCTTGATCCTAGGTTAGTTGGTTTTCTTCCTACACATAGAAAAATGGCAGAAGCTGATGCTAGTCAAATGAACAACATGAAAGATGCAAGCATTAGCACACGCCATATATATGCTATGTTAGCTAATCAAGCAGGTGGTTATGAAAATGTTAATTATACCTTAAGGGATATGTATAATGAGATTGCTAGGCGAAGGCGTCATGTCCTGGGTGATGCTAGAGCGGCATTGCGATACCTCAAAAACCAGAAAGCTGAAGATACAAGCCTCTATTATGAGCACATAGTTGATGCTAAAGGGCATTTTAAGCGGTGTCTTACCTACCTAAGATATAAGGAGGTTGAAGCTGACTATGTTTCCATATCTAGTCTTCCGGTACTTAAAACAGCATTAGAACCTCTGGAAAGGTCTGCATCAAATTTCTATACACGAGAGTTATTTTTTATATTTCGACCAATGCTTGTTAGGGCTGCAAGAATGAAGGTTGTGCAAGATGTGGCATTTGATTCATTTGTACTTTATACAATATCTAAATATGGAAGTCTAAATAGTTCATGGGAGGTGTCTGTGGATAATGAAAGGACGAAATTTAATTGTTCATGCTTAAGGATGGATTCTTTTGGAATTCCGTGTGAGCATATAGTTTGTGTGCTGGTGTTTCTTAACATCCTTGAACTGCCAAAGTCTCTTGTGTTGACAAGATGGTCGAAGAATGCCAAGACAAGCACTTTTGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGTCAATATGGATGCTTGATGGATTGGTGTCGGCAGCTATCCTATATCGCTAGTCGAAGGCAGGAGAGATTCCACCTTGTTCGAGATACTGTTATGAGCCTAATCGAAGATTTCAAGATTGAAGATGAACAAGAAAAGCAAGTTGGTGCGCAAGCTGATGATTCAGATGGTATTTTTCCTAAGAATCCACAAAGTTGTAGGTCTAAGTGTCGTCCAGGTGAGAAGATCAAACGAAAACCACAACGATGTAGTATTTGTCGCATGGAAGGGCACAATAAAAAATCTTGTCCATTGGCAAAGAACATTCAGCAGCAGACCAATGCAACTTCTTATGGCATAAATAGGAACCATGTTGAGAAAGGTTTAGATGCAGATGCAGAAATGGAATTTTGGGCATCTGATCTTGAAGAAGATTATGAAGAACAAGAGTTTTGGGCAGGAGATTCTGATGCAAGTGTCGACATGGAACTTAGTGAAGAGTTCTCGATTTAG 2292 0.3935 MEGRWHHHLVLHPKVHHLQESAIQFVHLSPGPGYQVLQQQTTSFNCQRRETFRTPLTLRVPADNTPAFSILFRSSLLFGLSSSESPIALLALDIIVLESPISIKIAVEAVEPSSCLFQNLEIENQSLDTVHMEHALDNGGINGGFDSGTREVRRPNLEVDDKMEERVFFDEMIEELDDTEEFQGMYQDKIEQEAVNSEDLGEHEFQEMFDGNDFSHEVDELYRIEDIENISMVNFLNIGAHEMECFHFPNLQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSHEGFRPEKYYNMKNRKREPKSETRCGCLARFVVRFVAYTGRWHVALFVESHNHDCLDPRLVGFLPTHRKMAEADASQMNNMKDASISTRHIYAMLANQAGGYENVNYTLRDMYNEIARRRRHVLGDARAALRYLKNQKAEDTSLYYEHIVDAKGHFKRCLTYLRYKEVEADYVSISSLPVLKTALEPLERSASNFYTRELFFIFRPMLVRAARMKVVQDVAFDSFVLYTISKYGSLNSSWEVSVDNERTKFNCSCLRMDSFGIPCEHIVCVLVFLNILELPKSLVLTRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCRQLSYIASRRQERFHLVRDTVMSLIEDFKIEDEQEKQVGAQADDSDGIFPKNPQSCRSKCRPGEKIKRKPQRCSICRMEGHNKKSCPLAKNIQQQTNATSYGINRNHVEKGLDADAEMEFWASDLEEDYEEQEFWAGDSDASVDMELSEEFSI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00314 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 455 587 IPR031052 GO:0006355
Adu01g00314 763 Pfam FAR1 DNA-binding domain 256 346 IPR004330 -
Adu01g00314 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 242 437 - -
Adu01g00314 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 455 587 - -
Adu01g00314 763 ProSiteProfiles Zinc finger SWIM-type profile. 530 566 IPR007527 GO:0008270
Adu01g00314 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 437 IPR031052 GO:0006355
Adu01g00314 763 SMART 26again6 541 568 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00314 Adu-Chr1 3963493 3967193 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g00314 FAR1 6.6e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00314 - - adu:110273530 640.958