Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00313 ATGAGAATATCGAGATCGAGATGGTTCACATTCTTGAGGAGAGTATTCCACTACCAAAACGGGCCGAGTTCTACTTCGTCAGAACTCGGCTCGAACCCTTTCATTTCCAGCACCTGGATGGGGCTGGAATTGGTTGCATTGGTGGTTCAAATAACTAGCACGACTCTCACTCTTGCGATTTCCAAGAGTGAGAGACCAATTTGGCCTATGAGGATTTGGGTAGCTGGTTATGACATTGCTTGTGTCCTTAATTTGTTGCTTCTTTGTGGCCGCTACCATCAAATTCATGTCACCACTCATAGAGATGTTCTTAGCGATTTGGAGCAGCAGAGATACAATAATGGAGATGCAAGCTTACAGAGAAGGGCACATTTGATGAACAAATGCCGGAGTTCATTAGAGCTTTTCTTTGCAATGTGGTTTGTGATGGGAAATGTTTGGGCCTTTGACTCACGGTTTGGGTCATTCCAAGAAGCCCCAAAACTCAATATTCTATGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTTTCCTATTGTTCTTGTTGCTTTGTTGCATTGTCCCTTTAA 591 0.4027 MRISRSRWFTFLRRVFHYQNGPSSTSSELGSNPFISSTWMGLELVALVVQITSTTLTLAISKSERPIWPMRIWVAGYDIACVLNLLLLCGRYHQIHVTTHRDVLSDLEQQRYNNGDASLQRRAHLMNKCRSSLELFFAMWFVMGNVWAFDSRFGSFQEAPKLNILCXXXXXXXXXXXXXXXXXLSYCSCCFVALSL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00313 196 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 167 - -
Adu01g00313 196 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00313 Adu-Chr1 3958991 3961821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00313 1 166 C3H Transcription Factor Family AT5G55970 63.473 5.30e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00313 - - ahf:112791228 337.421