Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00310 ATGGAAACTAGAAGAGAGGATGCTGAAATTGAAGACATTTCAATAATGTCACCTCCATTAGTGGGTTCTATGAAAATTGAAGGGTGCAACAATAATGAGTTTATGTCTCATTCATACTTTCACAACAACTGCTCTGAGATTGATATTCAAATTGATGATTCCAGTTTCAATCAAATTGGCCCTCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTTTAAAGTGAGAAACAATACACGAGCAGCTTCGAAAAACCCTGTGAAGAGAATAGTATCAAAGGTAAGTAGAGAAAATAAGAATAATAATGGGGAAGGTGATGATAAATACAAGAAGATTTTGAAGGGTATAACAGGAAGCATTGGACCTGGTGAAATTCTAGCACTAATGGGTCCTTCTGGGAGTGGCAAAACAACCTTGTTGAGAGTCATAGGAGCAAGATTACTTGACAATGTAAAAGGAAAAATCACCTACAACGATGTTCGTTATACGCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATATTCTTTTTCCACAATTAACTGTTGAAGAAACATTAGTTTTCTCCGCATTATTAAGGCTACCAACTAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGACACCACTATCAAGCAGCTAGGCCTTGAAAGATGTCGCAACACAAAAATAGGAGGGGGATATCTGAAAGGCATATCAGGAGGGGAAAGGAAGAGAACAAGCATAGGTTATGAAATTCTTGTTGATCCTTCATTGCTACTGCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAAACTTCTTGTCACTCTTCAGGGGCTTGCCAAGGCAGGAAGGACCATAATTACAACAATACATCAGCCATCAAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCGGTTTACTATGGTAAGGCCAGAGAATCAATGGACTACTTCTCTTCCTTGAGGTTCATGCCGGAGATACCGATGAATCCGGCCGAGTTCTTGCTCGACTTGGCTACCGGACAAGTCAACGATATAAGTTTTCCAGCCGAAGTTTTGCAAGATCAACTAACTAATGACCCTTCTAGAGCAGTTATTAATTATCTAAAAGTAAAGTATAAAGCTTTGTTGGAGCCAAAGGAAAAGGAAAACCATGGAGCAGCAACAACAGCAGAGCATCTTCAACAAGCAATTCAAGTTAAGAAGGAGTGGACATTGAGTTGGTTGGACCAATTTGTGATTCTTTCTAGGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATAAGTTAAGGCTAGTTCAAGCACTTGGCATTGCACTCTTGTTGGGATTACTTTGGTGGAAATCCTCAACCAACACTGAGGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATATGTATATTCTGGACATCTACATGCATTTTTGGAGCAGTGTACGTGTTTCCATTCGAAAAGATATACTTGATAAAAGAAAGGAAAGCAGACATGTATAGATTAAGCGTATACTACGCATGCAGCACGCTGTGTGACATGGTGGCGCATGTTTTCTATCCCACTTTCTTCATGATCATTGTCTATTTCATGGCCGGCTTCAAGAGGACCGTCGCTTGCTTCTTCTTGACTCTCTTCTCCGTTCTGTTAATCGCCGTCACCAGTCAGGGCGCTGGAGAATTGTTTGGAGCTGCAGTTATGAGTATTAAAAGAGCAGGCATGGCTGCTTCTTTGGTGCTTATGTTGTTCCTTCTTACTGGTGGCTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTGAAGTATTTATCCTACTTATTCTACGGATTCAGGCTTCTTCTAAAAGTGCAGTATTCCGGAGACCAATTATATGACTGTGAAAGTGAGGGAGGGTGCAGACCCTTGCAAAGTTCACCAACATTTAGCACTGTTAACTTGAAAGGTGGCTTGAAAGAAGTTTGGGTTGTGCTAGCCATGGCTATGTGCTTCAGGTTCTTGGCTTACATTTGCCTCCGCAGAAGAATTGATGCCTATAAATAA 2067 0.4074 METRREDAEIEDISIMSPPLVGSMKIEGCNNNEFMSHSYFHNNCSEIDIQIDDSSFNQIGPLPIYLKFEDVEFKVRNNTRAASKNPVKRIVSKVSRENKNNNGEGDDKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGARLLDNVKGKITYNDVRYTPAVKRRIGFVTQEDILFPQLTVEETLVFSALLRLPTNMSKQQKYAKVDTTIKQLGLERCRNTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLVTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARESMDYFSSLRFMPEIPMNPAEFLLDLATGQVNDISFPAEVLQDQLTNDPSRAVINYLKVKYKALLEPKEKENHGAATTAEHLQQAIQVKKEWTLSWLDQFVILSRRTFRARCKDYFDKLRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSTCIFGAVYVFPFEKIYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMIIVYFMAGFKRTVACFFLTLFSVLLIAVTSQGAGELFGAAVMSIKRAGMAASLVLMLFLLTGGYYVQHIPKFMQWLKYLSYLFYGFRLLLKVQYSGDQLYDCESEGGCRPLQSSPTFSTVNLKGGLKEVWVVLAMAMCFRFLAYICLRRRIDAYK 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00310 688 Pfam ABC-2 type transporter 292 353 IPR043926 GO:0140359
Adu01g00310 688 Pfam ABC transporter 113 263 IPR003439 GO:0005524
Adu01g00310 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 7 684 - -
Adu01g00310 688 SMART AAA_5 122 313 IPR003593 -
Adu01g00310 688 CDD ABCG_EPDR 108 317 - -
Adu01g00310 688 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
Adu01g00310 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 94 335 IPR003439 GO:0005524
Adu01g00310 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 7 684 - -
Adu01g00310 688 Gene3D - 100 330 IPR027417 -
Adu01g00310 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00310 Adu-Chr1 3924220 3930187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00310 111 296 Calmodulin-binding Proteins AT2G36910 30.526 9.53e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00310 K05681 - gmx:100806094 1093.57