Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00284 ATGGCTGTAACCGACCGGTGTTTCGTGGAATGGAAAGAGCAGTTTGTTTCCCAAGAGCGTGGCAACCGTGTGGTCCACTATTACCTGAAGGATTCTGACGGGGAATCCATACTCGCTGTTGTGGGCACTGAGAGGAGTGTTAGGCACATGTTCTATGTTGTGGCCGATGAGTTTTTGGAAATTTGTGGGAAGGAAGGTTCTGTTCCTGCCGGTTTCAAATGGAGATCTAGAAGAGAGGTGGTTGATTGGCTGACGTCAACGCTTTCGAAGCAGCATCTTCAGGGAGATAGAACTGGATCACCTAGTCATTCTTCAGGACAAGCTTATGATACCACAAATGGTAGTGTCAATGAAATTACTGGTCTTCCTGCACCGATAGCGAATAGCAAGGTATCTCTTGCTCAGGGATTTCTAACCCGAAACTCTAAAATATCCAAGTCTGACATTGTTTGGTCTGGAGTGGCGTGGACATGTGGCAAGCAGCTTAAACATTATCATGCTTTTTGCAGGAATGGCATCAAAATAATTGTTCAATCATTTGTTTTTGTCATGGGCAAGGGAGAGAATCATTATGTTGCTTATTTAGAGGATATGTATGAAGATAGGAGGGGGCAGAAAAAGGTCAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTGTGATTCCTGTTCGAAATCCACATCCCCGGGAAGTTTTCATCACACCTTATTCTCAAGTTATTAGTGCAGAGTGTGTTGATGGTCCCACCACGGTCTTAAGTCGTGAACATTATGAAAAATGCATGCCTTGCTTTTCCCCAACTTCATCAGATAGAATACATATGTGCTTTAGGCAATTTAGAAGCAACAAAGTTAAGCCCTTTGACTTGAGTAAACTGCGGGGATACTATGATCAACCAATTCTTTCTTGCTTGCAATTTGATTCTATGCTGAATCCTAAGGGAAATGGCCTAGCAGGAGGAGATGAAGAGTTGAGTGCAGGTGAAACTGTAAAGCTCAGAGCCAAGAGAAGGGATAGGGGAACCCCTCAGTCTTTGATTGGTCGGCGGGGAGTTAGGAAGTTAGTTAGGAGTCAGCAAATGATGGTATACAAAAACTCACAGGGTGTAAATAATTCTAGGGCAGATAGGAGATTGTTTTCTCTGAAGGAAGTTGAGTCTCAACCTTGGTATAATGTCACATACAGGATTGATGACAAGATAGAGGTCCTCTGTCAGGATAGCGGTATCAGAGGCTGCTGGTTCAGGTGTACGGTTGTGCAGGTATCTCGGAAGCAGATGAAAGTCCAATATGATGATATTCAGGATGAAGATGGAAGTGGGAATCTTAAGGAATGGATCCCTGCTTTCAAGTTGGCCATGCCTGATAAACTTGGGATGAGACATCCTGGCCGATCGACAATCAGACCAGCTCCTCCAACTTCCAAAGATCAAGAATTGGTTATTGGAGTTGGAACTGCAATTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGGGTTGTAACTGGAACTGATAACTATGTTGATGATAATGTGCAAGCATACTTTCCTGGTGAAGGCTTGCTAATGAAAGTACGCAAGAAAGATCTAAGAATATCTAGAGATTGGTCCGGGGACAGGTGGATTGGTATTAAGCCGAAGCTTGATATAACCTCAACTATATTCGCCATTAACGGCCTTAACACGAAGCACTCCACGTCCCCAGCTAAAGATGGGGACTCTATTGGTGTTGCAAATTCATGTGATGAAGTTCCAGCGAGTGACGAGCCTATTAATGAACCAGATTTTGCTGAAAAGATGGTTGAGGGTGTTGCTGAAGATGGGGATAACAATGATGATGGTTATAATGATAATAATGATAGTAAAAATAGTAATCTTGTGTCAGAAAAAGATACTCGAGCTGATAACAATGAGATTGAGATGAATAGCATTGGTAATGAAGATAATGGTGATGATTCTAATAAGGACAGTAATGACAATGTTGATAACAAAGACGGCGAAAACGATAATAAGGACAGGGAGGCGTTTGGGACTTCCATGGAGGACTGTAAAGCTGACGAACCCGCCGAAATGGCTGTATAA 2085 0.4326 MAVTDRCFVEWKEQFVSQERGNRVVHYYLKDSDGESILAVVGTERSVRHMFYVVADEFLEICGKEGSVPAGFKWRSRREVVDWLTSTLSKQHLQGDRTGSPSHSSGQAYDTTNGSVNEITGLPAPIANSKVSLAQGFLTRNSKISKSDIVWSGVAWTCGKQLKHYHAFCRNGIKIIVQSFVFVMGKGENHYVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISAECVDGPTTVLSREHYEKCMPCFSPTSSDRIHMCFRQFRSNKVKPFDLSKLRGYYDQPILSCLQFDSMLNPKGNGLAGGDEELSAGETVKLRAKRRDRGTPQSLIGRRGVRKLVRSQQMMVYKNSQGVNNSRADRRLFSLKEVESQPWYNVTYRIDDKIEVLCQDSGIRGCWFRCTVVQVSRKQMKVQYDDIQDEDGSGNLKEWIPAFKLAMPDKLGMRHPGRSTIRPAPPTSKDQELVIGVGTAIDAWWSDGWWEGVVTGTDNYVDDNVQAYFPGEGLLMKVRKKDLRISRDWSGDRWIGIKPKLDITSTIFAINGLNTKHSTSPAKDGDSIGVANSCDEVPASDEPINEPDFAEKMVEGVAEDGDNNDDGYNDNNDSKNSNLVSEKDTRADNNEIEMNSIGNEDNGDDSNKDSNDNVDNKDGENDNKDREAFGTSMEDCKADEPAEMAV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00284 694 CDD BAH_plant_1 168 297 - -
Adu01g00284 694 ProSiteProfiles BAH domain profile. 173 292 IPR001025 GO:0003682
Adu01g00284 694 SMART agenet_At_2 394 459 IPR014002 -
Adu01g00284 694 SMART agenet_At_2 481 539 IPR014002 -
Adu01g00284 694 MobiDBLite consensus disorder prediction 565 594 - -
Adu01g00284 694 MobiDBLite consensus disorder prediction 650 694 - -
Adu01g00284 694 Gene3D - 140 297 IPR043151 -
Adu01g00284 694 SMART BAH_4 173 292 IPR001025 GO:0003682
Adu01g00284 694 Pfam Agenet domain 399 474 IPR008395 -
Adu01g00284 694 MobiDBLite consensus disorder prediction 606 694 - -
Adu01g00284 694 MobiDBLite consensus disorder prediction 92 114 - -
Adu01g00284 694 Pfam BAH domain 177 277 IPR001025 GO:0003682
Adu01g00284 694 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 663 - -
Adu01g00284 694 PANTHER OS07G0607300 PROTEIN 4 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00284 Adu-Chr1 3567629 3573100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00284 408 538 PHD Transcription Factor Family AT5G58610 29.851 3.20e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00284 - - gmx:100306240 921.383