Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00259 ATGCAAACATCTCAAGAACATGAACTTCCCTATGGCTCTGGCAGGTTCTACATCGAGCCTGCCGAAAACCAGGAGTCATATTGCTTTCCATCAAGTGAGAACCTAGAAAACTACTCTTCCTCTGATAACAGCAACCAAGCAACCTACCCATTGGTCAAGATTTCGGATCCATATTGCACCCTTGAATCTGCTTCAACAAGTAATATCCCGGGCCAAAATTCTGCATCTACAGCCAATTTTTCGCCTAATGGTAGCCCGGTGTCAAAGCTAGAACCGAAATCACATGTCTTGAGGCCACAACATTCTCTCGAAACTACTAATGGCTCGCCGGAGATAAATTCTTGCTTGACACATGACTTTGATGATCTGAGGGATAAGATAAGAGAGCTTGAAACTGCTATGCTGGGACCTGATACAAGTACACTAAATATGTATGATATTGTGGTTCCGGAACCAGAAGAACCTGATTCCTTTTTGGTGGCTGCAGAGAAGTGGAAGAAAACAATGGAGATCATATCCAGAGGTGATTTAAAGGAGATGCTTTATACTTGTGCAAAATCAATGGCAGAGAACGATATGGAGACTACTGATTGGCTGATATCAGAGTTGCGAAAAATGGTTTCGATTTCAGGGGATCCTCTGCAACGATTAGGAGCATACATGTTGGAGTCTCTTATTGCAAGGATGGCTTGCACAGGAAGCAAAATCTACAAGGCCTTAAAATGCAGCGAGCCGACCGGCAACGAACTCCTTTCCTACATGCATGTACTCTATGAAATATGTCCATACTTCAAGTTTGGGTATATGTCGGCGAATGGAGCAATTGCTGAAGCTATGAAGGAGGAAAGTCATGTTCACATAATTGATTTTCAGATTAGCCAGGGAACTCAAGTTCCTGCTTCTGAGGTGCAACTAGAAGATCTTGAACTTCGAACTAATGAAGCTGTGGCAGTGAATTTTGCCATTATGCTGCACCATGTTCCGGATGAAAGTGTTACCAGTCTAAATCCTCGCGACCGGTTGTTGAGATTGGCAAAGAACTTGTCTCCCAAGGTAGTGACTCTAGTTGAGCAAGAGTTTAGTACTAATAATGCTCAATTCTTGCCGCGTTTCATGGTGACATTGAACTACTACTTGGCTGTTTTCGAATCGATTGATGCTGTCCTGCCAAGGGAGCACAAGGAGAGGATCAATGTTGAGCAGCACTGCTTGGCTAGAGAAGTTGTCAACTTAGTAGCATGTGAAGGGGAAGAAAGAGTCGAACGGCACGAGCTTCTGAACAAGTGGAGACGGCGTTTCATGGCTGCCGGATTCGCGCCTTATCCGCTGAGCTCCTTTGTTAATGCTTCAATCAAGACCCTTTTAGAAAGCTACCCTGGACATTACACTCTAGAAGAGAGAGATGGCACACTTTATCTTGGTTGGATGAATCAGGTTCTTATTGTCTCTTGTGCTTGGAGATGA 1464 0.4406 MQTSQEHELPYGSGRFYIEPAENQESYCFPSSENLENYSSSDNSNQATYPLVKISDPYCTLESASTSNIPGQNSASTANFSPNGSPVSKLEPKSHVLRPQHSLETTNGSPEINSCLTHDFDDLRDKIRELETAMLGPDTSTLNMYDIVVPEPEEPDSFLVAAEKWKKTMEIISRGDLKEMLYTCAKSMAENDMETTDWLISELRKMVSISGDPLQRLGAYMLESLIARMACTGSKIYKALKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEESHVHIIDFQISQGTQVPASEVQLEDLELRTNEAVAVNFAIMLHHVPDESVTSLNPRDRLLRLAKNLSPKVVTLVEQEFSTNNAQFLPRFMVTLNYYLAVFESIDAVLPREHKERINVEQHCLAREVVNLVACEGEERVERHELLNKWRRRFMAAGFAPYPLSSFVNASIKTLLESYPGHYTLEERDGTLYLGWMNQVLIVSCAWR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00259 487 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 298 486 - -
Adu01g00259 487 MobiDBLite consensus disorder prediction 63 88 - -
Adu01g00259 487 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 297 - -
Adu01g00259 487 MobiDBLite consensus disorder prediction 63 93 - -
Adu01g00259 487 ProSiteProfiles GRAS family profile. 168 487 IPR005202 -
Adu01g00259 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 297 IPR005202 -
Adu01g00259 487 Pfam GRAS domain family 177 300 IPR005202 -
Adu01g00259 487 Pfam GRAS domain family 301 487 IPR005202 -
Adu01g00259 487 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 298 486 IPR005202 -
Adu01g00259 487 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00259 Adu-Chr1 3329591 3331127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00259 169 487 GRAS Transcription Factor Family AT2G04890 54.839 1.52e-147 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Adu01g00259 GRAS 2.9e-65 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00259 - - aip:107620196 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00259 01 3329591 3331127 Adu07g00213 07 2071011 2073564 PCT