Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00256 ATGCTGCGAGCCAGCGAGCGTCCACTGCCCTTCCTCCCTGCCTTGCCGCGGTGTGGGCTCCACCGACACCGATTCGACTTCGCCGGAGCTGGATCCTTAGCTGGCGCTGCTAGCTGCTATATATCTTCAATCGGTTATACTCACACAAGTGGAAATAGGTATGCGGATGGAGTCTCCAGATTTCGACGAAGAAGAGGAGATTCCGTTGAAGGAGGAAACTTCCTTTACCTCCTCTTCGTCTTCGCCGACGAAAGGAGGACTAACTCATCACGGTCACAGTCACAGTCACAGTCATGGCTTTTGCGGATCACACGAATCAGGAGTCTTTATGTAGTCTTAATCAAAGCCAAGATCAACCTACTCCTCCCCTTTGGTCCACTCGCCATTGCCCTCCATTACCTCACCGGAAAACATGGATGGGTGTTCTTCTTCAGCTTGTTGGGTATTGCTCCTTTGGCAGAACGTTTGGGTTATGTTACTGAGCAACTTGCATTCTACACGGGACCAACAGTTGGGGGTCTGCTCAATGCCACATTTGGCAATGCAACCGAAATGATTATATCAATCTTTGCATTGAAAAACGACATGATTAGGGTTGTTCAACAATCGTTACTGGGCTCAATCTTGTCGAATATGCTCCTAGTTCTTGGATGTGCATTCTTTACCGGTGGGATTGTCCACTACAAAAAGGTGCAGGTTTTCAATAAGGCCGCTGCTGTTGTCAATTCCGGGTTGCTGTTGATGGCTGTGATGGGCATACTTTTCCCGGCGGTGCTTCACTTTACTCATTCAGAGGTTCACCTTGGGAAGTCGGTGTTATCTCTATCAAGATTTAGCAGCTGTGTAATGCTAGTCGCGTATGCCAGCTACCTTTTTTTTCAACTTAAGAGCCAGCCCAATCTTTATAGTCCTGTGGATGAGGAAGGAGTTAGTGGTGAAAATTCAGATGAGGAGGAAGAACTTGAATTAACTCAAGCGGAAGCAATAGTCTGGCTTGCTATCTTGACGGCATGGGTATCTTTATTGTCCGGGTACCTTGTAGACGCCATAGAGGGAGCATCTGAGTCATTAAATATGTCGATGGCATTTATCAGTGTCATCTTGCTCCCAATTGTTGGCAATGCTGCAGAACATGCAAGTGCTATCATGTTTGCCATGAAGGACAAACTTGATATCACCATTGGAGTTGCTGTTGGATCATCTACACAGATATCTATGTTTGTGATCCCATTCTGTGTGGTTGTTGGATGGTGTATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACCGCCACACTTTTTATCACGGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAACTATTTTAAAGGCTTGATGCTTATATTATGCTATCTTATTGTCGCTGCCAGTTTCTTCGTACATGTAGACCCTAAAACTGGTGATGACTAG 1446 0.4578 MLRASERPLPFLPALPRCGLHRHRFDFAGAGSLAGAASCYISSIGYTHTSGNRYADGVSRFRRRRGDSVEGGNFLYLLFVFADERRTNSSRSQSQSQSWLLRITRIRSLYVVLIKAKINLLLPFGPLAIALHYLTGKHGWVFFFSLLGIAPLAERLGYVTEQLAFYTGPTVGGLLNATFGNATEMIISIFALKNDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCVMLVAYASYLFFQLKSQPNLYSPVDEEGVSGENSDEEEELELTQAEAIVWLAILTAWVSLLSGYLVDAIEGASESLNMSMAFISVILLPIVGNAAEHASAIMFAMKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKTGDD 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00256 481 PANTHER VACUOLAR CATION/PROTON EXCHANGER 90 478 - -
Adu01g00256 481 Pfam Sodium/calcium exchanger protein 140 295 IPR004837 GO:0016021|GO:0055085
Adu01g00256 481 Pfam Sodium/calcium exchanger protein 329 468 IPR004837 GO:0016021|GO:0055085
Adu01g00256 481 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 90 478 IPR004713 GO:0006812|GO:0008324|GO:0016021
Adu01g00256 481 TIGRFAM cax: calcium/proton exchanger 121 471 IPR004798 GO:0006816|GO:0015369
Adu01g00256 481 Gene3D - 169 472 IPR044880 -
Adu01g00256 481 TIGRFAM caca2: calcium/proton exchanger 111 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00256 Adu-Chr1 3275152 3282668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00256 106 480 Antiporters AT1G55730 75.532 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00256 K07300 - gmx:100806000 658.677