Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00240 ATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGAAAGTATGAGCTTGGAAGGCAACCAGCAAACACAAAGCTCTCCAGCAACAAAACTGTTAGGAGGATCAGGGTTCGAGGTGGGAATGTAAAATGGCGTGCTTTGAGGCTTGACACTGGGAACTACTCTTGGGGTAGTGAAGCTGTGACTCGCAAAACGAGGATTCTTGATGTGGTGTATAATGCATCCAACAATGAACTTGTTCGAACTCAGACTTTGGTCAAGAGTGCCATCGTCCAGGTTGATGCTGCACCTTTCAAACAATGGTATCTCCAGCATTATGGTGTCGACATTGGTCGCAAGAAGAAGGGTGCAACTTCTGGCAAGAAAGAAGGGGAGGATGCTGAAACTGCAACCGAAGAAGTGAAGAAGAGTAACCATGTCTTGAGAAAGTTGGAGAAGCGTAAACAAACCCGGGTGCTTGATCCTCACATTGAAGAACAATTTGGAAGTGGTCGCCTCTTGGCTAGTATCTCATCCCGCCCCGGTCAATGTGGTCGTGCTGATGGATATATATTGGAGGGCaaagagcttgagttctacatgaagaagcttcagaaaaagaagggcaagggtgctgcttaa 636 0.434 MHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSGKKEGEDAETATEEVKKSNHVLRKLEKRKQTRVLDPHIEEQFGSGRLLASISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00240 211 TIGRFAM eS8: ribosomal protein eS8 2 192 IPR001047 GO:0003735|GO:0005840|GO:0006412
Adu01g00240 211 Coils Coil 132 152 - -
Adu01g00240 211 MobiDBLite consensus disorder prediction 118 139 - -
Adu01g00240 211 Gene3D - 25 154 - -
Adu01g00240 211 Gene3D - 155 208 - -
Adu01g00240 211 CDD Ribosomal_S8e_like 2 190 - -
Adu01g00240 211 PANTHER 40S RIBOSOMAL PROTEIN S8 1 211 - -
Adu01g00240 211 ProSitePatterns Ribosomal protein S8e signature. 4 23 IPR018283 GO:0003735|GO:0005840|GO:0006412
Adu01g00240 211 PANTHER 40S RIBOSOMAL PROTEIN S8 1 211 IPR001047 GO:0003735|GO:0005840|GO:0006412
Adu01g00240 211 Pfam Ribosomal protein S8e 2 190 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00240 Adu-Chr1 3101008 3103043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00240 1 199 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.422 1.07e-121 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00240 K02995 - gmx:100527325 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00240 01 3101008 3103043 Adu01g00240 01 3101008 3103043 ECH