Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00213 ATGAAGAAGAAGAACAGAAAGAGGAAGAAGAACGTGCAGCAAGAAGAAGAAGAAGGAGAAAGAGAAGGCAAGAAACGAAAGAAAAGAATAAGAAGAGGAAGAGGAAGAAGAACGTGCAAGAAGAAGAAGAACGAGAAAGAGAAAGCAAGAAACGAAAGCAAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAACGTGCAACAAGAAGAAGAAGAAGAAGGAGAAAGAGAAGGCAAGAAACGAAAGAAAAGAAGAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAACGTAGACCTTGTATCATGTTTTTGGGACGACGACTCTGTCCGACGAAACGGTTACGCTTTAGTGCTCCTTCCTGGTGCCGCTCTTGTACGCTACTTTCCTTTGTACATCGCCATCTTCCCGAGAAACGACGTCGTATCCATCACCCTCCATCGGAAGAAAACCCGATTCCTTCCTCTTAATTCCGAAACCCTACTTATAATTCGTCCCAAATTTAGTAGACCAATGGCATCGTCATCAGACTCATGGATGAAGGAATATAATGAAGCAGTGAAACTCGCCGATGATATCAATGGCATGATTTCTGAGCGGAGTTCATTATCCACATCTGGACCAGAAGCTCAGCGTCATGCATCTGCTATAAGAAGGAAGATTACTATCTTAGGGACCAGACTTGATAGCTTGCAATCCCTTTTATCTAAAGTCCCTGGAAAATCTGAGAAGGAGATGAATCGCCGCAGGGAAACACTTACAAATTTGAGGTCAAAAGTTAACCAAATGGCTTCAACACTGAACATGTCAAACTTTGCAAATAGGGATAGTTTATTTGGTCCTGAAATAAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGATAACAGTGGACTCGTTGGACTTCAAAGGCAAATTATGAAAGCAGAGCAAGATGAAGGCCTTGAAAAATTGGAGGAGACTGTTGTAAGTACAAAGCACATTGCATTAGCAGTGAATGAAGAGCTGAGTCTACACACTAGACTAATTGATGACTTGGACGAACATGTAGATGTTACAGATTCTCGTCTAAGGCGTGTCCAGAAGAACTTGGCAGTTTTAAACAAACGTACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTAGCAGTGGTTGGGATAGTGGTTTTGGTGGTTGTGATATGGTTGTTGGTCAAATATTTGTAG 1203 0.4214 MKKKNRKRKKNVQQEEEEGEREGKKRKKRIRRGRGRRTCKKKKNEKEKARNESKEEEEEEEEEEERATRRRRRRRKRRQETKEKKKKKRKRKKKKNVDLVSCFWDDDSVRRNGYALVLLPGAALVRYFPLYIAIFPRNDVVSITLHRKKTRFLPLNSETLLIIRPKFSRPMASSSDSWMKEYNEAVKLADDINGMISERSSLSTSGPEAQRHASAIRRKITILGTRLDSLQSLLSKVPGKSEKEMNRRRETLTNLRSKVNQMASTLNMSNFANRDSLFGPEIKPDAMSRTVGLDNSGLVGLQRQIMKAEQDEGLEKLEETVVSTKHIALAVNEELSLHTRLIDDLDEHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLAVVGIVVLVVVIWLLVKYL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00213 400 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 171 394 - -
Adu01g00213 400 MobiDBLite consensus disorder prediction 1 94 - -
Adu01g00213 400 MobiDBLite consensus disorder prediction 25 44 - -
Adu01g00213 400 SUPERFAMILY SNARE fusion complex 301 365 - -
Adu01g00213 400 PANTHER SYNTAXIN 171 394 IPR045242 -
Adu01g00213 400 Coils Coil 36 74 - -
Adu01g00213 400 CDD SNARE_Qc 307 364 - -
Adu01g00213 400 Gene3D - 308 368 - -
Adu01g00213 400 MobiDBLite consensus disorder prediction 70 94 - -
Adu01g00213 400 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 304 366 IPR000727 -
Adu01g00213 400 Coils Coil 2 22 - -
Adu01g00213 400 MobiDBLite consensus disorder prediction 10 24 - -
Adu01g00213 400 Pfam SNARE domain 341 392 IPR000727 -
Adu01g00213 400 SMART tSNARE_6 299 366 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00213 Adu-Chr1 2862049 2866444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00213 171 400 SNARE and Associated Proteins AT1G16240 72.961 3.59e-121 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00213 K08503 - gmx:100794038 372.089