Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00178 ATGACAAATTTGCCCCCGTCATTATCAATGAACGCAGCCTTTGGCGGCAGCGGTGCTGCTCCTCCGCCTTCTCCCGGTGGCTCCTCCCAGAGCTCCCCCGGAGGCAACAAGGATCGCAAGATGGCCTCCGCCGAGCAGCTCGTCCTCGAGCTCAGCAACCCCGACCTCCGTGAAAACGCTCTACTCGAACTCTCCAAGAAGAGAGAATTATTTCAAGATCTTGCTCCATTATTATGGAATTCATTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCTCCACCAAATCTTACTCCAGCACAATCTAATCGTGTGTGCAATGCACTTGCTCTTCTTCAGTGCGTAGCCTCACACCCTGATACAAGGATGTTGTTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAATCAAGACCATTTGAGTACTTGAGACTCACCAGTCTTGGCGTCATTGGTGCTTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACTGAGATAATTCCATTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTATCAAAAACAGTTGCAACTTTCATTGTTCAGAAAATCCTATTGGACGACGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTTTTTGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAGCCCTCATCTCGTTTGTTGAAGCATATCATCCGATGCTATCTTCGCCTATCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAACTGCCTTCGTGAGGACCTTACAACCAGGAGGTGGCTGCAACAATTGCTTCAGAATGTTGGTGTGAGTCGGGTGCCCACTCTGCAAGCCGGAGGCGGCTTCGACCATATGATGGTGACATGA 978 0.4714 MTNLPPSLSMNAAFGGSGAAPPPSPGGSSQSSPGGNKDRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSNCLREDLTTRRWLQQLLQNVGVSRVPTLQAGGGFDHMMVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00178 325 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Adu01g00178 325 Coils Coil 324 325 - -
Adu01g00178 325 MobiDBLite consensus disorder prediction 23 37 - -
Adu01g00178 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
Adu01g00178 325 MobiDBLite consensus disorder prediction 1 42 - -
Adu01g00178 325 SUPERFAMILY ARM repeat 49 277 IPR016024 -
Adu01g00178 325 Gene3D - 35 306 IPR011989 -
Adu01g00178 325 PANTHER UNCHARACTERIZED 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00178 Adu-Chr1 2388226 2395223 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Adu01g00178 Rcd1 2.8e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00178 K12606 - gmx:100784529 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00178 01 2388226 2395223 Adu07g00263 07 2420450 2423923 PCT