Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00127 ATGACTGGAACCGCGGTCAAGCATTTGGCCGAGAATGATCCCAATAGGCACGGAACTCCACCTGCGCAGAAGGAGGCCATCGAAGCATTGCCTACCGTGACAATTGACGAGAATATGCAATGTTCTATTTGCCTTGATGATCTTGAAGTTGGTTCTGAAGCCAAACAGATGCCCTGTAAACATATGTTTCATAGTGGATGTATCCTTCCTTGGTTGGAGCTCCATAGTTCTTGTCCGGTTTGCAGGTATCAGTTGCCCGCTGATGAATCTAAGCGCGAACCGGATGCATCCTTGAGGACTAGCAGTAATCAAAGGGAGGATGAAAATACTGGACATGACAATGTTGATGGGGATATTGAAGGAAGAAATGCAAGTGGGAGTAGAAGATTCTCCTTTCCATGGCCTTTCAATGGTTTATTTTCTTCACCAAACCCTTCAGCAGCATCTTCTTCTAGCAACAATCCAAATGGAGATAATGTTACTCGATCAGAAGAGAACTGA 501 0.4491 MTGTAVKHLAENDPNRHGTPPAQKEAIEALPTVTIDENMQCSICLDDLEVGSEAKQMPCKHMFHSGCILPWLELHSSCPVCRYQLPADESKREPDASLRTSSNQREDENTGHDNVDGDIEGRNASGSRRFSFPWPFNGLFSSPNPSAASSSSNNPNGDNVTRSEEN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00127 166 MobiDBLite consensus disorder prediction 86 123 - -
Adu01g00127 166 MobiDBLite consensus disorder prediction 141 160 - -
Adu01g00127 166 SUPERFAMILY RING/U-box 31 90 - -
Adu01g00127 166 MobiDBLite consensus disorder prediction 85 126 - -
Adu01g00127 166 ProSiteProfiles Zinc finger RING-type profile. 41 82 IPR001841 -
Adu01g00127 166 CDD RING-H2_RNF126_like 40 82 - -
Adu01g00127 166 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 6 140 - -
Adu01g00127 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 89 IPR013083 -
Adu01g00127 166 MobiDBLite consensus disorder prediction 141 166 - -
Adu01g00127 166 SMART ring_2 41 81 IPR001841 -
Adu01g00127 166 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 140 - -
Adu01g00127 166 MobiDBLite consensus disorder prediction 1 22 - -
Adu01g00127 166 Pfam Ring finger domain 40 82 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00127 Adu-Chr1 1802198 1802769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00127 17 88 C3H Transcription Factor Family AT1G26800 52.055 1.77e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00127 K11982 - gmx:100784876 225.713