Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g00127 | ATGACTGGAACCGCGGTCAAGCATTTGGCCGAGAATGATCCCAATAGGCACGGAACTCCACCTGCGCAGAAGGAGGCCATCGAAGCATTGCCTACCGTGACAATTGACGAGAATATGCAATGTTCTATTTGCCTTGATGATCTTGAAGTTGGTTCTGAAGCCAAACAGATGCCCTGTAAACATATGTTTCATAGTGGATGTATCCTTCCTTGGTTGGAGCTCCATAGTTCTTGTCCGGTTTGCAGGTATCAGTTGCCCGCTGATGAATCTAAGCGCGAACCGGATGCATCCTTGAGGACTAGCAGTAATCAAAGGGAGGATGAAAATACTGGACATGACAATGTTGATGGGGATATTGAAGGAAGAAATGCAAGTGGGAGTAGAAGATTCTCCTTTCCATGGCCTTTCAATGGTTTATTTTCTTCACCAAACCCTTCAGCAGCATCTTCTTCTAGCAACAATCCAAATGGAGATAATGTTACTCGATCAGAAGAGAACTGA | 501 | 0.4491 | MTGTAVKHLAENDPNRHGTPPAQKEAIEALPTVTIDENMQCSICLDDLEVGSEAKQMPCKHMFHSGCILPWLELHSSCPVCRYQLPADESKREPDASLRTSSNQREDENTGHDNVDGDIEGRNASGSRRFSFPWPFNGLFSSPNPSAASSSSNNPNGDNVTRSEEN | 166 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g00127 | 166 | MobiDBLite | consensus disorder prediction | 86 | 123 | - | - | |
Adu01g00127 | 166 | MobiDBLite | consensus disorder prediction | 141 | 160 | - | - | |
Adu01g00127 | 166 | SUPERFAMILY | RING/U-box | 31 | 90 | - | - | |
Adu01g00127 | 166 | MobiDBLite | consensus disorder prediction | 85 | 126 | - | - | |
Adu01g00127 | 166 | ProSiteProfiles | Zinc finger RING-type profile. | 41 | 82 | IPR001841 | - | |
Adu01g00127 | 166 | CDD | RING-H2_RNF126_like | 40 | 82 | - | - | |
Adu01g00127 | 166 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 6 | 140 | - | - | |
Adu01g00127 | 166 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 7 | 89 | IPR013083 | - | |
Adu01g00127 | 166 | MobiDBLite | consensus disorder prediction | 141 | 166 | - | - | |
Adu01g00127 | 166 | SMART | ring_2 | 41 | 81 | IPR001841 | - | |
Adu01g00127 | 166 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 6 | 140 | - | - | |
Adu01g00127 | 166 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Adu01g00127 | 166 | Pfam | Ring finger domain | 40 | 82 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g00127 | Adu-Chr1 | 1802198 | 1802769 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g00127 | 17 | 88 | C3H Transcription Factor Family | AT1G26800 | 52.055 | 1.77e-23 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g00127 | K11982 | - | gmx:100784876 | 225.713 |