Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00112 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGACAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATGCTCCTAAGACTCTTTCATGGACAAAAGAAGATGCATACATACCAAAATATTATCATACTTCTTCTATTGGTCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGTTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTCCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACACACAAAATGACTCACAAACATTTTTCCCTACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGTTATCAACCTTCAAGGCATTGCTATTGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGACATACTGTGACTTCAAACCCCATCAACCCATTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTCTGTCACGACACCTCTCTCAAACCTTCTCAAACTGGCTCTGTATACAATTTCGACCCATGCTCTGATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAAGAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTTTTTTTCAGTGGAAGGACAGCCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATGTCTGGATATACAGGCAAGTTCAATATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGTATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1404 0.4309 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENAPKTLSWTKEDAYIPKYYHTSSIGPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNVGRDLFYYFVESPANSSQYNPLVLWLNGVANVLFLESPAGVGFSYTQNDSQTFFPTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSVINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIETYCDFKPHQPISSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKPSQTGSVYNFDPCSDVYVQAYLNRPEVQEALHAKPTQWSHCSFFQWKDSPVTVLPLIKKLIDHNINVWIYRQVQYSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLVFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00112 467 Gene3D alpha/beta hydrolase 136 307 IPR029058 -
Adu01g00112 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 134 461 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Adu01g00112 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 Pfam Serine carboxypeptidase 93 135 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 Pfam Serine carboxypeptidase 136 457 IPR001563 GO:0004185|GO:0006508
Adu01g00112 467 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Adu01g00112 467 Gene3D alpha/beta hydrolase 73 135 IPR029058 -
Adu01g00112 467 PANTHER CARBOXYPEPTIDASE 134 461 - -
Adu01g00112 467 Gene3D - 313 354 - -
Adu01g00112 467 SUPERFAMILY alpha/beta-Hydrolases 85 460 IPR029058 -
Adu01g00112 467 Gene3D - 364 458 - -
Adu01g00112 467 PANTHER CARBOXYPEPTIDASE 21 135 - -
Adu01g00112 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 135 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00112 Adu-Chr1 1584678 1591305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00112 332 460 Calmodulin-binding Proteins AT2G22960 28.777 2.94e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00112 K16297 - gmx:100779407 570.466