Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00094 ATGCGTTATCCTACAACATTGACCGTTTTATGCGCTGCATTTCTTTTGCAGATACCATCGATCGCTTCAATTCCGGTTCCTAGTTCCAATTGCTATACTTTCGATAATTCTAGTCGTATTGTTGATTTCACTAGCTGGATCGGATACCTGTTTGAGTATGATGTAAAGGAAGGTACTGACTTAGCGGTCCGATTCTGCAAAGATGTCGAGAGTAGATCACAAACGGGATATGTTGATTTTGGTCGATTTGATAAATACAACTACTTTGTTGCTGGTTCACACGAATCTGACTTTGTTCAAGAGTTCTATAATGGTGACTTGATGGGTTGTGAGCAAAGTTATGATAAAATGGGACGGACAGCTCAGGTCAATATCATTTGTGGGAGTTGTTTGAATGGACAATGTAAAGGTCGACCTGGATGCATATGTAATGTCACTTATGAATCAAACTGCAGAGTTTCAGTTGAACTTGCTTTACCATGTGAAAAACCGGGCCCACAAGTATTTCAAGGCTTCACGGTTGGTTTTCATCCACGATCATGGGAAATTGTTTATAATGGCATGACACAATTTGGTTTTGAGAAACCCAACCGTGATTTTAGCTTTGATGCAGGGCAATCTCAGGTAGTCCTTTTTATGACTGCAGTAGCTTCGCACTCATCCTTAGTTGGAAAGCCTAGTTTGAAGGTTCTTCCAGAGAAGGGCTTGGAAATTAGATTGTCTGGATCTGCCAACCATGGGAAGCCTCCTACAACTTTGTCACCCACAATGTTGATTGTGGATTGGAGATGCGAGGTAGTCCGTGATACTCCATATGAAGTTAATATAACAATCCCAATTGAGGGTTATGAGAGTATTGAATTTGTGCTTACAAAACTGTGCGACTATACACAGGAAGAAGGTGAAGATGCCAGAAAAGGATGGGCAATATTTGGGGTGCTTTCTTGCATATTCTTTGTCTCTTCAACCCTCTTCTGCTGTGGAGGGTTCATTTACAAGACAAAAGTGGAACGCCAGCGTGGAATCGATGCTTTGCCTGGCATGACAATCCTATCTGCGTGTTTAGAGACAATTAGCGGAGCAGGGCAAAGCTACATGCGGCCGGAAGAGCAAAATAGTGCCTTTGGTGGCGAAGCCTCTTGGGAGCGCCCTCCTCCTAGTTCATCTCAAGGCTCCCACTCAACACAGAGCTTCAGCTTCCGTCACTCTCCACCCTCCACCCATAGTCACTCTCACTCACACCCGCAGTCTCGCACAGACGGCCTCACCCTTCACGATCGCACTTCCGTCCTCACCCCTCACGCTCGCAGAGTCGCAGTCACCGTCGCTCTTCGGTCCTCCTGGCTCTCTGGGTCTCCTTGTCTGTCCTCATCGCCGCTGCTCCTCGCCTCCTCTGTCCTGGTCCTCGGCTCGTCACCACTCCTCTGTTCTGAGATGGGTGAGGAGGTGAAAGCAATTGTTCCCGAGTCTGTGCTTAAGAAGCAGAAGAGGGAGGGGGAATGGGCCTTGAAGAAAAAGGAGGAGCTTAATGCTGCAAAGAAGAAGAGAGCTGAGAGCCGCAAGCTCATTTACAGCAGGGCAAAGCAATATGCAAAGGAATACCAGGAGCAGGAAAAGGAGCTGATCCAATTGAAGCGGGAAGCAAAGCTGAAAGGTGGATTCTATGTTGATCCAGAGGCTAAACTCCTGTTTATCATCCGCATCCGTGGTATCAATGCCATGGACCCCAAGTCAAGAAAGATCTTGCAGTTGTTGAGGTTGAGACAGATCTTCAATGGTGTGTTCCTCAAGGTTAACAAGGCCACAATGAACATGCTTCACAGGGTTGAACCATATGTGACCTATGGATACCCAAATTTGAAGAGTGTAAAAGAGCTTATTTACAAGAGGGGCTTTGGTAAGTTGAACAAGCAGAGAATTGCCCTAACCGACAACAACATCATTGAGAAGGCACTGGGCGAACATGGAATCATCTGCATCGAAGATCTTATCCATGAGATCATAACAGTTGGACCCCATTTCAAGGAAGCAAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCATTGGGTGGCTTGAAGAAGAAGAGGAACCACTATGTTGAAGGAGGAGATGCCGGAAACAGGGAGAACTACATCAATGAGCTTATCAGGAGAATGAATTAG 2166 0.4598 MRYPTTLTVLCAAFLLQIPSIASIPVPSSNCYTFDNSSRIVDFTSWIGYLFEYDVKEGTDLAVRFCKDVESRSQTGYVDFGRFDKYNYFVAGSHESDFVQEFYNGDLMGCEQSYDKMGRTAQVNIICGSCLNGQCKGRPGCICNVTYESNCRVSVELALPCEKPGPQVFQGFTVGFHPRSWEIVYNGMTQFGFEKPNRDFSFDAGQSQVVLFMTAVASHSSLVGKPSLKVLPEKGLEIRLSGSANHGKPPTTLSPTMLIVDWRCEVVRDTPYEVNITIPIEGYESIEFVLTKLCDYTQEEGEDARKGWAIFGVLSCIFFVSSTLFCCGGFIYKTKVERQRGIDALPGMTILSACLETISGAGQSYMRPEEQNSAFGGEASWERPPPSSSQGSHSTQSFSFRHSPPSTHSHSHSHPQSRTDGLTLHDRTSVLTPHARRVAVTVALRSSWLSGSPCLSSSPLLLASSVLVLGSSPLLCSEMGEEVKAIVPESVLKKQKREGEWALKKKEELNAAKKKRAESRKLIYSRAKQYAKEYQEQEKELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRIALTDNNIIEKALGEHGIICIEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00094 721 SUPERFAMILY Ribosomal protein L30p/L7e 562 721 IPR036919 -
Adu01g00094 721 MobiDBLite consensus disorder prediction 383 412 - -
Adu01g00094 721 CDD Ribosomal_L7_archeal_euk 562 721 IPR035808 -
Adu01g00094 721 Gene3D - 666 721 IPR036919 -
Adu01g00094 721 Gene3D - 562 665 IPR036919 -
Adu01g00094 721 PANTHER G-PROTEIN COUPLED RECEPTOR 5 397 - -
Adu01g00094 721 Coils Coil 527 551 - -
Adu01g00094 721 MobiDBLite consensus disorder prediction 368 423 - -
Adu01g00094 721 ProSitePatterns Ribosomal protein L30 signature. 581 613 IPR018038 -
Adu01g00094 721 TIGRFAM uL30_euk: 60S ribosomal protein uL30 488 721 IPR005998 GO:0000463|GO:0003735|GO:0022625
Adu01g00094 721 Pfam Ribosomal L30 N-terminal domain 487 558 IPR012988 -
Adu01g00094 721 Pfam Ribosomal protein L30p/L7e 563 613 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00094 Adu-Chr1 1310560 1321116 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00094 482 721 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.417 1.10e-149 434