Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g00068 | ATGGAAGGTGCAAGACCAACTTTTATGTTTCAAGAACCACCTAATTGCCCTGAAAATAGTGAACAAGTTAAATTGGAAGTTAGTCTACCGAATTGTTCATTTCTCCGGACAGAAGGTCCTCGGATAGAAAGGCTAGCCAAAGGACAGCAGTCTGTGTGTGAACTCCTTACTAATTCAGATTGCCAATGCCGCGGAGCTAGTGACAGTCAAGTGGAATTCCGAAAGGAATCCGATAGTTTCTGTGATAGTATTGATGATGAGATAAACGAACCTTGGTTAACCTCTGAGATTTCTGTCTCTGTTGTGGATACAAATGCAAGTGAATCGCCAATTAATGGTAAGGAAGAAGATTTCTTATTTTCCGAACCCACTTGGCTCAAGGGAGATGAATCTGTGGCAGTGTGGGTGAAGTGGAGAGGAAAGTGGCAAGCTGGTATCCGATGTGCGAGGGCTGATTGGCCATTATCAACCTTGAGAGCAAAACCAACTCATGACCGGAAGAAATATTTTGTCATGTTTTTCCCGCATACAAAGAATTATTCCTGGGCTGATACGCTGCTTGTTCAATCAATCAATGAGTTTCCCCAGCCTATTGCACATAAAACTCATAAAGCAGGATTGAAAATGGTAAAAGACTTGACTGTTGCTCGAAGATTTATAATGCAAAAGCTAACTATTGACATGCTGAACGTTGTTGATCAGCTTCATCCCAATGCTTTGATAGAAGCTGCTTGTCATTTGATGTTCTGGAAGGAATTTGCTATGGAGGCTTCTCGTTGCTCTCTCTATTCTGATTTTGGCGGAATGCTTCCAAAGCTGCAAAATAGCATATTACAACAATACTTAAATGCTGCGTGGATGCAACATTCTTTCCACTCTTGGGTTGGACGATGTCAAAATGCAAAAAGTGCTGAATCAGTAGAGTTGCTGAAGGAGGAGTTGTTTGATTCTATTTTGTGGAGTGATATCAACCCTCAATCGAATGCACTTCTGCAGTCAACATTGGGTTTTGAGTGGAAAACATGGAAGCATGATGTAATGAAATGGTTTTCCCCATTTCATTCTTTATCTGGTAGCAAGAACACAAAGCATCTGACCTCTGACAATCTGTATCAACAGAGCCTTCACATCGGTAGAAAACGGGCCAAACTTGAAGTTCGACGTGCAGAAACACATGCTTCACTAATGGAAACCAAGGGTTCAATTCCTTCAGTTACACTTGAGACTGACCCAGGTGTCTTTAATAACCAGAACACATTGAGTACATTAGCAACTGAGACTTCTAAAAAGGAATGTGCAAGGGAGGTACCTATAGCAACAACCGAATCGCGAAGTAATTTGGCCAATAAATGGAATGAGATCATAGTTGAGGCTGTAGGTTCAGAGATCCTGCATACCAATGGACTGGGATCAACTCCTACAAATGAAATGGCTATTCAAAAATATGTAGAGCCTGTAACTAAGAATCCACAATGCATAGTTTATATTGAAGCCAAGGGAAGACAGTGTGTGAGATCAGCAATTGATAATGATGTATATTGTTGCGTGCATTCTCGTTTTCTGGGCATCTTAGCAAAAGCTGAAAAACATGTTTCAGTTGATACACCAATGTGTGAAGGTAGAACTGCTGTTGGTACTAGATGTAAGCATCATGCTGTTCCTGCTTCTTCATTCTGCAAGAAACACCAACCTCATGATGAGACCGCAAATTTTACACACAATACACGGAAAAGAAATCATGAAAATTATATTGCTTCAGAGGGCATGTTTTGCAAAGACATTGTATTGGCAAATGTCGAAGGTCCATTGGAAGTTGACCCCATATCAACCTTTCGTGGAGGTTTGTTAAATGAGAATCCCACGCATTCTGACAATAATCATAATGCAATGGAGGCAGTTAACTGTGTAGGCTTTCCTCCCTTTGATGAAAAAGATCCTTGTTCCGAAGCTCCAAAATGGCATTTCTTGTACTGTGAAAAGCACCTTCCAAGTTGGCTTAAACGGGCAAGACATGGAAAGAGTAGGATAATATCAAAAGAAGTGTTTGAAGAGCTCTTGAGGAGTTGCTACTCATGGGAACAAAAGGTACATTTGCATAAAGCTTGTGAGCTTTTTTACAGGCTCTTCAAAAGCATTTTGTCGCAAAAAAGCTCTGTTCCTAAGGAAGTTCAGCTGCAGTGTGCTTTGACCGAAGCCTCTAAAGATGCAAGTGTTGGAAAATTCTTCACAAAGTTGGTTCATAGTCAAAAGGAGAACATCAAGTCGATTTGGGGATTCAAGGATGATGTGGATGTATCCTCACTCATAGAAGATTCATCTCTTTTCCTTACCACAAGTAATGACAGCTCTGGAAATGAAAATGCCATCAAGTGTAAGATATGCTATGCTGAATATCCTGATGACCAAACACTTAGTAACCATTGGATGGAGAATCATAAAAAGGAAGCACAGTGGTTGTTTAGAGGTTATGCTTGTGCCATTTGTTTGGATTCCTTTACTAACAAGAAACTACTGGAAACCCACGTTCAGGAGAGACATCATGTGCAGTTCGTTGAGCAGTGCTTGCTTCTGCAATGTATTCCCTGTGGTTTTCATTTTGGTAATATGGAAGAATTATGGCTGCATGTTCTAACTGTTCACCCTGTTGAGTTTAAGTCATCCAAAGCTCCAAGTCAACAGTCTTTCTCTACAGGCGAGCACTCTAGTGAAAAACTTGAATATGGAATTTCAGCTCCCTTGGAGAATATGTCTGAGAATCCAGGTGGTTTTCGGAAGTTTACTTGCAGGTTTTGTGGGTTGAAATTTGATCTTCTACCTGACCTTGGTCGCCATCATCAAGCTGCTCATATGGGTCACAGTGCAGCAAGTGGCCGCCCTCCAAAGAGGGGAGTTCGTTATCATGAGTATAGATTGAAATCTGGAATACTTTGCCGTCCTAAATTTCGAAAGAGTTTGGCGGCAGCATCATATATGATCAGAAGTAAGGCAACTGCTAATTTAAAGAGACGCATTGAGGCGACAAAGTCCCTTGGCATGGAGGAAATAACAATACAACCTCATTTAACTGAGACAGATAATTTTGGTAGATTGGCAGAACATCAATGTTCCACAGTCGCAAAGATTTTATTTTCCGAGAGTCGGATGACTAAACCTCGGCCTAACAATCTTGATATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGACGGTCTTAAGGCCTCACTAGAGGAGAAATATGGAATTTTGCGTGAAAGGGTCTATTTGAAGGCAGCAAAACTTTGCAGTGACTATGACATTGTAGTGAACTGGCACCAGGATGGGTTTATTTGTCCTAGAGGCTGTAAGGTATCAAAGGATCAAGTGTCACTTTCTCCCTTAGCATCTCTTTCTAATAGGTTTGTAAGGAAAAACTCTATAATTTTGTCAGATCCTGAAAGTGATGAGTTCAAGGTGGATGAGTCTCACTACATCATCAATTCAAACCATTTAAAGTTTGGATCCCTGCAAAAGGCTGTTGTATTATGCGATGACATAAGCTTTGGGAAAGAATCAATTCCGATGATCTGTGTAGTTGACCAAAATCTTCTAAATTCACTTCGAAATGGATCCAACGAGCAAGATCAGCCTTGGGAGAGCTTTACCTATATTTCAAAGCCAATTCTTGATCGATCCCTTTGTCTTGATTCTGAGAGTCTGCAACTGGGATGCTCTTGTTCATATCCCACCTGCTTTCCTGAATCTTGTGATCACGTCTACCTTTTTAATAATGACTATGATGATGCAAAAGACATTTCAGGGAAACCAATGCGTGGCAGGTTCCCATACGATGAGAATGGTCGAATCATATTAGAGGAAGGTTACCTTGTATATGAGTGTAATCAAATGTGCAGATGCAAAAGATCATGTCCAAATAGAATACTGCAGAATGGAGTACGGGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGTTGGTGAGGCTATCTTGCGTGGCACATTTGTGTGTGAGTATATTGGAGAGGTTATAGATGAGTGTGAGGCACAAAACAGACGCAAGAGATACGGCAAAGAGCATTGTAGTTATTTCTTTAATGTTGATGCTCGTGTCAATGACATGAGTAGATTGATTGAAGGACAAGCCAGATATGTTATTGATGCTACTAGATATGGAAATTTATCCAGGTTCATCAATAACAGTTGCTCACCCAATCTTGTGAATTACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGCGCACATATTGGTCTTTATGCGAGTCGAGATATTGCTTTGGGTGAAGAACTAACATATAATTATAATTATGAGCTAGTGCCTGGAGAAGGGTGTCCTTGCCTTTGTGGTTCTTTGACGTGCCGAGGACGGCTTTACTAG | 4407 | 0.4078 | MEGARPTFMFQEPPNCPENSEQVKLEVSLPNCSFLRTEGPRIERLAKGQQSVCELLTNSDCQCRGASDSQVEFRKESDSFCDSIDDEINEPWLTSEISVSVVDTNASESPINGKEEDFLFSEPTWLKGDESVAVWVKWRGKWQAGIRCARADWPLSTLRAKPTHDRKKYFVMFFPHTKNYSWADTLLVQSINEFPQPIAHKTHKAGLKMVKDLTVARRFIMQKLTIDMLNVVDQLHPNALIEAACHLMFWKEFAMEASRCSLYSDFGGMLPKLQNSILQQYLNAAWMQHSFHSWVGRCQNAKSAESVELLKEELFDSILWSDINPQSNALLQSTLGFEWKTWKHDVMKWFSPFHSLSGSKNTKHLTSDNLYQQSLHIGRKRAKLEVRRAETHASLMETKGSIPSVTLETDPGVFNNQNTLSTLATETSKKECAREVPIATTESRSNLANKWNEIIVEAVGSEILHTNGLGSTPTNEMAIQKYVEPVTKNPQCIVYIEAKGRQCVRSAIDNDVYCCVHSRFLGILAKAEKHVSVDTPMCEGRTAVGTRCKHHAVPASSFCKKHQPHDETANFTHNTRKRNHENYIASEGMFCKDIVLANVEGPLEVDPISTFRGGLLNENPTHSDNNHNAMEAVNCVGFPPFDEKDPCSEAPKWHFLYCEKHLPSWLKRARHGKSRIISKEVFEELLRSCYSWEQKVHLHKACELFYRLFKSILSQKSSVPKEVQLQCALTEASKDASVGKFFTKLVHSQKENIKSIWGFKDDVDVSSLIEDSSLFLTTSNDSSGNENAIKCKICYAEYPDDQTLSNHWMENHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCLLLQCIPCGFHFGNMEELWLHVLTVHPVEFKSSKAPSQQSFSTGEHSSEKLEYGISAPLENMSENPGGFRKFTCRFCGLKFDLLPDLGRHHQAAHMGHSAASGRPPKRGVRYHEYRLKSGILCRPKFRKSLAAASYMIRSKATANLKRRIEATKSLGMEEITIQPHLTETDNFGRLAEHQCSTVAKILFSESRMTKPRPNNLDILSIARSACCKDGLKASLEEKYGILRERVYLKAAKLCSDYDIVVNWHQDGFICPRGCKVSKDQVSLSPLASLSNRFVRKNSIILSDPESDEFKVDESHYIINSNHLKFGSLQKAVVLCDDISFGKESIPMICVVDQNLLNSLRNGSNEQDQPWESFTYISKPILDRSLCLDSESLQLGCSCSYPTCFPESCDHVYLFNNDYDDAKDISGKPMRGRFPYDENGRIILEEGYLVYECNQMCRCKRSCPNRILQNGVRVKLEVFKTEKKGWAVRVGEAILRGTFVCEYIGEVIDECEAQNRRKRYGKEHCSYFFNVDARVNDMSRLIEGQARYVIDATRYGNLSRFINNSCSPNLVNYQVLVESMDCERAHIGLYASRDIALGEELTYNYNYELVPGEGCPCLCGSLTCRGRLY | 1468 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g00068 | 1468 | Pfam | Pre-SET motif | 1179 | 1305 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Adu01g00068 | 1468 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 859 | 880 | IPR013087 | - | |
Adu01g00068 | 1468 | SMART | preset_2 | 1175 | 1297 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Adu01g00068 | 1468 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 49 | 1468 | - | - | |
Adu01g00068 | 1468 | SMART | c2h2final6 | 857 | 880 | IPR013087 | - | |
Adu01g00068 | 1468 | SMART | c2h2final6 | 789 | 812 | IPR013087 | - | |
Adu01g00068 | 1468 | SMART | c2h2final6 | 823 | 846 | IPR013087 | - | |
Adu01g00068 | 1468 | SMART | c2h2final6 | 926 | 949 | IPR013087 | - | |
Adu01g00068 | 1468 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 | 49 | 1468 | - | - | |
Adu01g00068 | 1468 | ProSiteProfiles | Post-SET domain profile. | 1452 | 1468 | IPR003616 | - | |
Adu01g00068 | 1468 | ProSiteProfiles | Pre-SET domain profile. | 1234 | 1310 | IPR007728 | GO:0005634|GO:0008270|GO:0018024|GO:0034968 | |
Adu01g00068 | 1468 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 823 | 846 | IPR013087 | - | |
Adu01g00068 | 1468 | Pfam | SET domain | 1324 | 1445 | IPR001214 | GO:0005515 | |
Adu01g00068 | 1468 | Pfam | Zinc finger C2H2-type, 3 repeats | 825 | 950 | IPR040689 | - | |
Adu01g00068 | 1468 | ProSiteProfiles | SET domain profile. | 1313 | 1445 | IPR001214 | GO:0005515 | |
Adu01g00068 | 1468 | SMART | set_7 | 1313 | 1451 | IPR001214 | GO:0005515 | |
Adu01g00068 | 1468 | Gene3D | Classic Zinc Finger | 771 | 849 | - | - | |
Adu01g00068 | 1468 | Gene3D | SET domain | 1156 | 1449 | IPR046341 | - | |
Adu01g00068 | 1468 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 926 | 954 | IPR013087 | - | |
Adu01g00068 | 1468 | SUPERFAMILY | SET domain | 1167 | 1458 | IPR046341 | - | |
Adu01g00068 | 1468 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 928 | 949 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g00068 | Adu-Chr1 | 1039168 | 1048229 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g00068 | 121 | 1467 | C2H2 Transcription Factor Family | AT2G23740 | 50.000 | 0.0 | 1282 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Adu01g00068 | Pre-SET | 5.2e-14 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g00068 | - | - | ahf:112789085 | 2991.06 |