Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00068 ATGGAAGGTGCAAGACCAACTTTTATGTTTCAAGAACCACCTAATTGCCCTGAAAATAGTGAACAAGTTAAATTGGAAGTTAGTCTACCGAATTGTTCATTTCTCCGGACAGAAGGTCCTCGGATAGAAAGGCTAGCCAAAGGACAGCAGTCTGTGTGTGAACTCCTTACTAATTCAGATTGCCAATGCCGCGGAGCTAGTGACAGTCAAGTGGAATTCCGAAAGGAATCCGATAGTTTCTGTGATAGTATTGATGATGAGATAAACGAACCTTGGTTAACCTCTGAGATTTCTGTCTCTGTTGTGGATACAAATGCAAGTGAATCGCCAATTAATGGTAAGGAAGAAGATTTCTTATTTTCCGAACCCACTTGGCTCAAGGGAGATGAATCTGTGGCAGTGTGGGTGAAGTGGAGAGGAAAGTGGCAAGCTGGTATCCGATGTGCGAGGGCTGATTGGCCATTATCAACCTTGAGAGCAAAACCAACTCATGACCGGAAGAAATATTTTGTCATGTTTTTCCCGCATACAAAGAATTATTCCTGGGCTGATACGCTGCTTGTTCAATCAATCAATGAGTTTCCCCAGCCTATTGCACATAAAACTCATAAAGCAGGATTGAAAATGGTAAAAGACTTGACTGTTGCTCGAAGATTTATAATGCAAAAGCTAACTATTGACATGCTGAACGTTGTTGATCAGCTTCATCCCAATGCTTTGATAGAAGCTGCTTGTCATTTGATGTTCTGGAAGGAATTTGCTATGGAGGCTTCTCGTTGCTCTCTCTATTCTGATTTTGGCGGAATGCTTCCAAAGCTGCAAAATAGCATATTACAACAATACTTAAATGCTGCGTGGATGCAACATTCTTTCCACTCTTGGGTTGGACGATGTCAAAATGCAAAAAGTGCTGAATCAGTAGAGTTGCTGAAGGAGGAGTTGTTTGATTCTATTTTGTGGAGTGATATCAACCCTCAATCGAATGCACTTCTGCAGTCAACATTGGGTTTTGAGTGGAAAACATGGAAGCATGATGTAATGAAATGGTTTTCCCCATTTCATTCTTTATCTGGTAGCAAGAACACAAAGCATCTGACCTCTGACAATCTGTATCAACAGAGCCTTCACATCGGTAGAAAACGGGCCAAACTTGAAGTTCGACGTGCAGAAACACATGCTTCACTAATGGAAACCAAGGGTTCAATTCCTTCAGTTACACTTGAGACTGACCCAGGTGTCTTTAATAACCAGAACACATTGAGTACATTAGCAACTGAGACTTCTAAAAAGGAATGTGCAAGGGAGGTACCTATAGCAACAACCGAATCGCGAAGTAATTTGGCCAATAAATGGAATGAGATCATAGTTGAGGCTGTAGGTTCAGAGATCCTGCATACCAATGGACTGGGATCAACTCCTACAAATGAAATGGCTATTCAAAAATATGTAGAGCCTGTAACTAAGAATCCACAATGCATAGTTTATATTGAAGCCAAGGGAAGACAGTGTGTGAGATCAGCAATTGATAATGATGTATATTGTTGCGTGCATTCTCGTTTTCTGGGCATCTTAGCAAAAGCTGAAAAACATGTTTCAGTTGATACACCAATGTGTGAAGGTAGAACTGCTGTTGGTACTAGATGTAAGCATCATGCTGTTCCTGCTTCTTCATTCTGCAAGAAACACCAACCTCATGATGAGACCGCAAATTTTACACACAATACACGGAAAAGAAATCATGAAAATTATATTGCTTCAGAGGGCATGTTTTGCAAAGACATTGTATTGGCAAATGTCGAAGGTCCATTGGAAGTTGACCCCATATCAACCTTTCGTGGAGGTTTGTTAAATGAGAATCCCACGCATTCTGACAATAATCATAATGCAATGGAGGCAGTTAACTGTGTAGGCTTTCCTCCCTTTGATGAAAAAGATCCTTGTTCCGAAGCTCCAAAATGGCATTTCTTGTACTGTGAAAAGCACCTTCCAAGTTGGCTTAAACGGGCAAGACATGGAAAGAGTAGGATAATATCAAAAGAAGTGTTTGAAGAGCTCTTGAGGAGTTGCTACTCATGGGAACAAAAGGTACATTTGCATAAAGCTTGTGAGCTTTTTTACAGGCTCTTCAAAAGCATTTTGTCGCAAAAAAGCTCTGTTCCTAAGGAAGTTCAGCTGCAGTGTGCTTTGACCGAAGCCTCTAAAGATGCAAGTGTTGGAAAATTCTTCACAAAGTTGGTTCATAGTCAAAAGGAGAACATCAAGTCGATTTGGGGATTCAAGGATGATGTGGATGTATCCTCACTCATAGAAGATTCATCTCTTTTCCTTACCACAAGTAATGACAGCTCTGGAAATGAAAATGCCATCAAGTGTAAGATATGCTATGCTGAATATCCTGATGACCAAACACTTAGTAACCATTGGATGGAGAATCATAAAAAGGAAGCACAGTGGTTGTTTAGAGGTTATGCTTGTGCCATTTGTTTGGATTCCTTTACTAACAAGAAACTACTGGAAACCCACGTTCAGGAGAGACATCATGTGCAGTTCGTTGAGCAGTGCTTGCTTCTGCAATGTATTCCCTGTGGTTTTCATTTTGGTAATATGGAAGAATTATGGCTGCATGTTCTAACTGTTCACCCTGTTGAGTTTAAGTCATCCAAAGCTCCAAGTCAACAGTCTTTCTCTACAGGCGAGCACTCTAGTGAAAAACTTGAATATGGAATTTCAGCTCCCTTGGAGAATATGTCTGAGAATCCAGGTGGTTTTCGGAAGTTTACTTGCAGGTTTTGTGGGTTGAAATTTGATCTTCTACCTGACCTTGGTCGCCATCATCAAGCTGCTCATATGGGTCACAGTGCAGCAAGTGGCCGCCCTCCAAAGAGGGGAGTTCGTTATCATGAGTATAGATTGAAATCTGGAATACTTTGCCGTCCTAAATTTCGAAAGAGTTTGGCGGCAGCATCATATATGATCAGAAGTAAGGCAACTGCTAATTTAAAGAGACGCATTGAGGCGACAAAGTCCCTTGGCATGGAGGAAATAACAATACAACCTCATTTAACTGAGACAGATAATTTTGGTAGATTGGCAGAACATCAATGTTCCACAGTCGCAAAGATTTTATTTTCCGAGAGTCGGATGACTAAACCTCGGCCTAACAATCTTGATATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGACGGTCTTAAGGCCTCACTAGAGGAGAAATATGGAATTTTGCGTGAAAGGGTCTATTTGAAGGCAGCAAAACTTTGCAGTGACTATGACATTGTAGTGAACTGGCACCAGGATGGGTTTATTTGTCCTAGAGGCTGTAAGGTATCAAAGGATCAAGTGTCACTTTCTCCCTTAGCATCTCTTTCTAATAGGTTTGTAAGGAAAAACTCTATAATTTTGTCAGATCCTGAAAGTGATGAGTTCAAGGTGGATGAGTCTCACTACATCATCAATTCAAACCATTTAAAGTTTGGATCCCTGCAAAAGGCTGTTGTATTATGCGATGACATAAGCTTTGGGAAAGAATCAATTCCGATGATCTGTGTAGTTGACCAAAATCTTCTAAATTCACTTCGAAATGGATCCAACGAGCAAGATCAGCCTTGGGAGAGCTTTACCTATATTTCAAAGCCAATTCTTGATCGATCCCTTTGTCTTGATTCTGAGAGTCTGCAACTGGGATGCTCTTGTTCATATCCCACCTGCTTTCCTGAATCTTGTGATCACGTCTACCTTTTTAATAATGACTATGATGATGCAAAAGACATTTCAGGGAAACCAATGCGTGGCAGGTTCCCATACGATGAGAATGGTCGAATCATATTAGAGGAAGGTTACCTTGTATATGAGTGTAATCAAATGTGCAGATGCAAAAGATCATGTCCAAATAGAATACTGCAGAATGGAGTACGGGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGTTGGTGAGGCTATCTTGCGTGGCACATTTGTGTGTGAGTATATTGGAGAGGTTATAGATGAGTGTGAGGCACAAAACAGACGCAAGAGATACGGCAAAGAGCATTGTAGTTATTTCTTTAATGTTGATGCTCGTGTCAATGACATGAGTAGATTGATTGAAGGACAAGCCAGATATGTTATTGATGCTACTAGATATGGAAATTTATCCAGGTTCATCAATAACAGTTGCTCACCCAATCTTGTGAATTACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGCGCACATATTGGTCTTTATGCGAGTCGAGATATTGCTTTGGGTGAAGAACTAACATATAATTATAATTATGAGCTAGTGCCTGGAGAAGGGTGTCCTTGCCTTTGTGGTTCTTTGACGTGCCGAGGACGGCTTTACTAG 4407 0.4078 MEGARPTFMFQEPPNCPENSEQVKLEVSLPNCSFLRTEGPRIERLAKGQQSVCELLTNSDCQCRGASDSQVEFRKESDSFCDSIDDEINEPWLTSEISVSVVDTNASESPINGKEEDFLFSEPTWLKGDESVAVWVKWRGKWQAGIRCARADWPLSTLRAKPTHDRKKYFVMFFPHTKNYSWADTLLVQSINEFPQPIAHKTHKAGLKMVKDLTVARRFIMQKLTIDMLNVVDQLHPNALIEAACHLMFWKEFAMEASRCSLYSDFGGMLPKLQNSILQQYLNAAWMQHSFHSWVGRCQNAKSAESVELLKEELFDSILWSDINPQSNALLQSTLGFEWKTWKHDVMKWFSPFHSLSGSKNTKHLTSDNLYQQSLHIGRKRAKLEVRRAETHASLMETKGSIPSVTLETDPGVFNNQNTLSTLATETSKKECAREVPIATTESRSNLANKWNEIIVEAVGSEILHTNGLGSTPTNEMAIQKYVEPVTKNPQCIVYIEAKGRQCVRSAIDNDVYCCVHSRFLGILAKAEKHVSVDTPMCEGRTAVGTRCKHHAVPASSFCKKHQPHDETANFTHNTRKRNHENYIASEGMFCKDIVLANVEGPLEVDPISTFRGGLLNENPTHSDNNHNAMEAVNCVGFPPFDEKDPCSEAPKWHFLYCEKHLPSWLKRARHGKSRIISKEVFEELLRSCYSWEQKVHLHKACELFYRLFKSILSQKSSVPKEVQLQCALTEASKDASVGKFFTKLVHSQKENIKSIWGFKDDVDVSSLIEDSSLFLTTSNDSSGNENAIKCKICYAEYPDDQTLSNHWMENHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCLLLQCIPCGFHFGNMEELWLHVLTVHPVEFKSSKAPSQQSFSTGEHSSEKLEYGISAPLENMSENPGGFRKFTCRFCGLKFDLLPDLGRHHQAAHMGHSAASGRPPKRGVRYHEYRLKSGILCRPKFRKSLAAASYMIRSKATANLKRRIEATKSLGMEEITIQPHLTETDNFGRLAEHQCSTVAKILFSESRMTKPRPNNLDILSIARSACCKDGLKASLEEKYGILRERVYLKAAKLCSDYDIVVNWHQDGFICPRGCKVSKDQVSLSPLASLSNRFVRKNSIILSDPESDEFKVDESHYIINSNHLKFGSLQKAVVLCDDISFGKESIPMICVVDQNLLNSLRNGSNEQDQPWESFTYISKPILDRSLCLDSESLQLGCSCSYPTCFPESCDHVYLFNNDYDDAKDISGKPMRGRFPYDENGRIILEEGYLVYECNQMCRCKRSCPNRILQNGVRVKLEVFKTEKKGWAVRVGEAILRGTFVCEYIGEVIDECEAQNRRKRYGKEHCSYFFNVDARVNDMSRLIEGQARYVIDATRYGNLSRFINNSCSPNLVNYQVLVESMDCERAHIGLYASRDIALGEELTYNYNYELVPGEGCPCLCGSLTCRGRLY 1468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00068 1468 Pfam Pre-SET motif 1179 1305 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu01g00068 1468 ProSitePatterns Zinc finger C2H2 type domain signature. 859 880 IPR013087 -
Adu01g00068 1468 SMART preset_2 1175 1297 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu01g00068 1468 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 49 1468 - -
Adu01g00068 1468 SMART c2h2final6 857 880 IPR013087 -
Adu01g00068 1468 SMART c2h2final6 789 812 IPR013087 -
Adu01g00068 1468 SMART c2h2final6 823 846 IPR013087 -
Adu01g00068 1468 SMART c2h2final6 926 949 IPR013087 -
Adu01g00068 1468 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 49 1468 - -
Adu01g00068 1468 ProSiteProfiles Post-SET domain profile. 1452 1468 IPR003616 -
Adu01g00068 1468 ProSiteProfiles Pre-SET domain profile. 1234 1310 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu01g00068 1468 ProSiteProfiles Zinc finger C2H2 type domain profile. 823 846 IPR013087 -
Adu01g00068 1468 Pfam SET domain 1324 1445 IPR001214 GO:0005515
Adu01g00068 1468 Pfam Zinc finger C2H2-type, 3 repeats 825 950 IPR040689 -
Adu01g00068 1468 ProSiteProfiles SET domain profile. 1313 1445 IPR001214 GO:0005515
Adu01g00068 1468 SMART set_7 1313 1451 IPR001214 GO:0005515
Adu01g00068 1468 Gene3D Classic Zinc Finger 771 849 - -
Adu01g00068 1468 Gene3D SET domain 1156 1449 IPR046341 -
Adu01g00068 1468 ProSiteProfiles Zinc finger C2H2 type domain profile. 926 954 IPR013087 -
Adu01g00068 1468 SUPERFAMILY SET domain 1167 1458 IPR046341 -
Adu01g00068 1468 ProSitePatterns Zinc finger C2H2 type domain signature. 928 949 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00068 Adu-Chr1 1039168 1048229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00068 121 1467 C2H2 Transcription Factor Family AT2G23740 50.000 0.0 1282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu01g00068 Pre-SET 5.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00068 - - ahf:112789085 2991.06