Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00058 ATGGGAATAGCAACACCGCCACCAATTCCTTCCATTCTCTCTCACTCAAAGACTAATAACTACCAGCAGCACCATTCTTTCACCATAATCGAGAAGCCTGAAGAAGAAGAAGAAGAAGGATTAAACGCTTCTAATTCTATGTCCCAAGATTACCACCACCACAATCAAGGAATCTTCACCTTCTCCAATAATGGGTTCGAGAGATCCACACAGGTAACAAACCAAGAACACCATCACCAACATCAACACCACTTGGCTCAGCAAATTCGGAGGGACAAAGTGAGGGTGCAAGGCTTCGATCCACAGCAACCGCCTCCGGCACAGCCACCAACAGCCATAATTGGAATAGAAGAATCCGGAGGCATCCCGGGGTACGAAACTGCCGGGATGCTATCGGAGATGTTCAATTTCCCGCCGGTTGTAGATGCTGCGGCCGGGGAATTATTGGAGCAGCCAATGATAGCGACGTTTCGTTCCCCAACGACGACGAGGTCATTGGGTAGCGATTGGTATGGTGGAAACAGACAAGGGATGATAACCGGGTTGGGAGCGTTGGGAGATAATTCAAAGAATAATCATAATCAACATGATCAAAGTAATTTGAACAACGGTGGTGTCATAGTTCATCATCAACATGATAATCAGATTCCTAGCATTAATGCCGATTCAGCTGCAGCCATGCAACTTTTCCTCATGAACCCACAAACCACAACCAGATCACCTTCCCCTCCGTCCCATCACACCACACCCACTCCTCCTTCGTCTTCTTCGACGCTTCACATGCTTCTTCCTAATCCTAATCCCAATACTTCCCTACAAGGCTTCCATGGTGGTGGTGGTGGTACCTTCAACCAAATCACATGGGCCCCTGACAGTGCTCAAGAAGCTCAAGGCCTCTCTTTATCCTTATCCTCTTCGTTACAGCACCTGGAAGCCGCGAAAGCCGAGGAATTGAGGATGGGAGAAAGTGGTTTCCTCTTTTACAACCAAGGAGTTGGTGGTGGTCCTTCATCTTCCTCTTCTTCTGCTCAGTATCCTTACAAGAATCTCCCTGGCCATCACCAACAACACCAAGCATTGCATATTCAAGGACCCATTGGGTTTGGATCATCATCTTCGTCTTTGGGTCTAGTCAACGTCCTCAGGAATTCCAAGTATGTCAAGGCCGCTCAGGAGTTGCTTGAAGAGTTCTGCAGCGTTGGGAGGGGTCAGTTCAAGAAAAACAAGTTCACTAGGCAGCTCTCAAACCCTAGCTCCAATCAAGGTGGCGCCGCCGCCGCTTCTTCATCTTCTTCAAAGGAACTGCCTCCTTTGTCAGCTTCTGATAGGATCGAGCATCAAAGGCGGAAGGTCAAGCTTCTCACCATGCTTGATGAGGCATGTGGTTCAATTAATATTCAATTTATTACTAAACAGGTGGACCGTAGGTACAGTCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTCGACCTGGTGATGGGGTACGGGGCGGCGGTACCGTACACGGCGCTGGCGCAGAAGGCGATGTCGCGGCACTTCCGGTGCCTGAAGGATGCAATAACGACGCAGTTGAAACACAGCTGCGAGGTACTTGGAGAGAAGGAAGGGGTGGGGACGACGGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGCTGGAGCAGAGCTTGAGGCAGCAGAGGGCGTTCCACCAAATGGGGATGATAGAGCAGGAGGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTCTTCGAGCATTTTCTTCACCCGTACCCAAGCGATGCAGATAAGCATCTCTTAGCAAGACAGACTGGGTTATCAAGAAATCAGGTGTCAAACTGGTTTATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTTGAAGACATGTACCAACAAGAACTCAAAGAAGCAGAGAGTACAATAGCAGAAGAAGAAGACGACAATGAAGGAGAAAGCAACAACAATAGTGGCAATCATGTACAAACGCCACTACCACCATCATCAACAACTACAACACCACCACCACTTCAATTATCATCGTCAACACCAACAAGTAATAATAACAACAATGTTAATAAAAGATCAGATATTATCATCAATGCTCAAGATAGTAACCCTTCATTAGCAGCAATTAATAGACAAGGCTTAGAAATTCAAGCAAAGCAGCCTGCTACAAGTTCCACCGCCATCACCACCGTCACCCCACCTGTAGTGTCACAGTGTTTTGACTCAGAGCACCTACTAAATGAGGATACGTGTGGCCATGGAAGCATAGTGAGTGCAGAATATGGAACCCCTTCTGGTGTTGCTGCAATGACTGAGATAGGGTCTTCTTCAAGTACTCTCATCAGGTTTGGGACTACAGCTGCACCCGGCGACGTGTCACTCACGCTAGGGCTACGACACACTGGGAACAACTCCTTTCTCCATTAG 2469 0.4848 MGIATPPPIPSILSHSKTNNYQQHHSFTIIEKPEEEEEEGLNASNSMSQDYHHHNQGIFTFSNNGFERSTQVTNQEHHHQHQHHLAQQIRRDKVRVQGFDPQQPPPAQPPTAIIGIEESGGIPGYETAGMLSEMFNFPPVVDAAAGELLEQPMIATFRSPTTTRSLGSDWYGGNRQGMITGLGALGDNSKNNHNQHDQSNLNNGGVIVHHQHDNQIPSINADSAAAMQLFLMNPQTTTRSPSPPSHHTTPTPPSSSSTLHMLLPNPNPNTSLQGFHGGGGGTFNQITWAPDSAQEAQGLSLSLSSSLQHLEAAKAEELRMGESGFLFYNQGVGGGPSSSSSSAQYPYKNLPGHHQQHQALHIQGPIGFGSSSSSLGLVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFTRQLSNPSSNQGGAAAASSSSSKELPPLSASDRIEHQRRKVKLLTMLDEACGSINIQFITKQVDRRYSHYCEQMHMVVNSFDLVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEGVGTTGLTKGETPRLKMLEQSLRQQRAFHQMGMIEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAESTIAEEEDDNEGESNNNSGNHVQTPLPPSSTTTTPPPLQLSSSTPTSNNNNNVNKRSDIIINAQDSNPSLAAINRQGLEIQAKQPATSSTAITTVTPPVVSQCFDSEHLLNEDTCGHGSIVSAEYGTPSGVAAMTEIGSSSSTLIRFGTTAAPGDVSLTLGLRHTGNNSFLH 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00058 822 Coils Coil 639 666 - -
Adu01g00058 822 MobiDBLite consensus disorder prediction 251 278 - -
Adu01g00058 822 Gene3D - 579 641 - -
Adu01g00058 822 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 115 818 - -
Adu01g00058 822 MobiDBLite consensus disorder prediction 650 704 - -
Adu01g00058 822 MobiDBLite consensus disorder prediction 685 704 - -
Adu01g00058 822 ProSiteProfiles 'Homeobox' domain profile. 573 636 IPR001356 GO:0003677
Adu01g00058 822 MobiDBLite consensus disorder prediction 70 120 - -
Adu01g00058 822 SUPERFAMILY Homeodomain-like 578 643 IPR009057 -
Adu01g00058 822 MobiDBLite consensus disorder prediction 412 437 - -
Adu01g00058 822 MobiDBLite consensus disorder prediction 1 23 - -
Adu01g00058 822 MobiDBLite consensus disorder prediction 412 442 - -
Adu01g00058 822 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 115 818 - -
Adu01g00058 822 Pfam Associated with HOX 380 523 IPR006563 -
Adu01g00058 822 SMART prehox3 375 524 IPR006563 -
Adu01g00058 822 SMART HOX_1 576 640 IPR001356 GO:0003677
Adu01g00058 822 Pfam Homeobox KN domain 593 632 IPR008422 GO:0003677|GO:0006355
Adu01g00058 822 MobiDBLite consensus disorder prediction 235 278 - -
Adu01g00058 822 CDD homeodomain 576 637 IPR001356 GO:0003677
Adu01g00058 822 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00058 Adu-Chr1 930150 942156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00058 44 623 Homeobox Transcription Factor Family AT4G36870 47.567 3.40e-137 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Adu01g00058 POX 2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00058 - - tcc:18611010 792.727