Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00056 atggggcggtaccagctgggcgcgcttcgtgattctttaagaATTCCACCGGTACCGAATTCTGCTGCAGTGAACCAAACCTTGTGTTTTCTAGGTTTTCAAACTGCAATGGACCATGCCGAATTAACCACCGACCAGGTTCTGAGGAGGGACATTCCATGGGAGACGTACATGTCTACCAAGCTCATCTCTGGCACAAGCCTTCAGCTCTTAAGGCGTTATGATCACCGATCAGAGAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCGGCTTATGTTCGCGTGTTTGTTCATGTCTTGCGTGATATTTTCAAAGAAGATACTGTAGAATATGTTTTGGCTCTAATTGATGAGATGCTGGCTGCGAACCCGAAAAGAGCAAGATTGTTTCATGATAGCTCCCTTTCAGATGAAGATACCTATGAGCCTTTCTTAAGAAACTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTGATAGTTAGTGCCAGGCCTAAAAATCAGAATGGTGTTGTTTCAAATGGAGATACATCAAAGAAACCCTTCACCACTATTGATGATGTTTTGAGAGCATTGGTAAAATGGCTTTGTGAACAGCTCAAGAAGCCATCTCATCCCAATCGTGGAGTCCCAACTGCTGTCAATTGCTTAGCAACTCTGCTTAAGGAACATCTGGTTAGGTCTTCCTTTGTTCAAGCAGATGGAGTGAAGTTGCTTGTGCCATTGATTTCACCAGCATCCACCCAACAATCTATTCAGATTCTGTATGAAGCATGTCTCTGCATATGGCTGCTATCCTATTATGATCCGGCAATTGAATATTTGGCTACTTCGAGGGCCCTTCCACGACTTATTGACGTTGTTAAGACTTCTACAAAAGAGAAGGTAGTTAGAGTAGTGGTCTTGACTCTTAGAAACTTGCTGTCAAAAGGGAGTTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTAAAAGCTCAAGCTTGGAGTGATGAGGACCTGCTGGAGGCATTGAATTCTCTTGAAGAAGGGCTAAAAGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTCCTGCTTGGTCATCTGGATTGGTCCCCGATGCACAAAGATCCATTGTTTTGGCGAGAAAATATTAATCACTTTGAAGAAAATGACTTCCAGATTCTAAGGGTCCTAGTTACAATTCTTGATACGTCTAGTGATCCAAGAACTCTGGCTGTTGCTTGCTTTGACATTTCACAGTTCATCCAGCACCATCCTTCTGGCCGGATCATTGTGGCGGACCTTAAAGCCAAGGAACGAGTAATGAAACTAATGAATCATGAGAATACCGAGGTTACTAAAAATGCACTGCTCTGCATCCAACGGCTTTTCTTAGGGGCAAAGTATGCAAGCTTTTTGCAAGCCTAG 1446 0.4149 MGRYQLGALRDSLRIPPVPNSAAVNQTLCFLGFQTAMDHAELTTDQVLRRDIPWETYMSTKLISGTSLQLLRRYDHRSESHRAQLLDDDGPAYVRVFVHVLRDIFKEDTVEYVLALIDEMLAANPKRARLFHDSSLSDEDTYEPFLRNWFIQEKSCKILALIVSARPKNQNGVVSNGDTSKKPFTTIDDVLRALVKWLCEQLKKPSHPNRGVPTAVNCLATLLKEHLVRSSFVQADGVKLLVPLISPASTQQSIQILYEACLCIWLLSYYDPAIEYLATSRALPRLIDVVKTSTKEKVVRVVVLTLRNLLSKGSLGAQMVDFQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDPLFWRENINHFEENDFQILRVLVTILDTSSDPRTLAVACFDISQFIQHHPSGRIIVADLKAKERVMKLMNHENTEVTKNALLCIQRLFLGAKYASFLQA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00056 481 Gene3D - 372 473 IPR038497 -
Adu01g00056 481 Gene3D - 34 360 IPR011989 -
Adu01g00056 481 PIRSF V-ATP_synth_H 32 480 IPR004908 GO:0000221|GO:0046961|GO:1902600
Adu01g00056 481 SMART arm_5 224 269 IPR000225 GO:0005515
Adu01g00056 481 SMART arm_5 431 471 IPR000225 GO:0005515
Adu01g00056 481 SMART arm_5 270 311 IPR000225 GO:0005515
Adu01g00056 481 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 37 481 IPR004908 GO:0000221|GO:0046961|GO:1902600
Adu01g00056 481 Pfam V-ATPase subunit H 39 352 IPR004908 GO:0000221|GO:0046961|GO:1902600
Adu01g00056 481 SUPERFAMILY ARM repeat 43 471 IPR016024 -
Adu01g00056 481 Pfam V-ATPase subunit H 358 470 IPR011987 GO:0000221|GO:1902600
Adu01g00056 481 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 37 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00056 Adu-Chr1 904383 912468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00056 37 481 Primary Pumps ATPases(2) AT3G42050 77.556 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00056 K02144 - gmx:100796479 777.704