Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00055 ATGCAATCCTTTACCATCATTATCCATGTCCTCACCTTGTCCTTATTGTATCATTTCTATGTGATTCTAGCTCAGCAACCTTACATTGGTGTGGCCACAAATGCATGTTCCCAAACTCTTAACTCAAATTCAATCCTTGGTTACACTTGCAATGGCTTGAAACCTAGTTGCCAATCTTACCTTACCTTCAAGTCTCAAATCAACTACAACTCTGTTCCTACAATTTCTTCTTTGTTAAACATTGATCCCACCCAGCTTTCCAAAGCGAATTCCGTTTCCCAGAACGCAACCTTTGAAATAAACAAGCTGGTGATTGTTCCTGTAAACTGTTCCTGTTTTGCTAATCAGTATTATCAGTATAACACTTCTTATAAGGTCCAAAGTGGAGACAACTATTTCATCATTGCTAACAACACTTTTGAAGGCCTTTCAACATGTCAAGCAATGAAGGATCAAAACAAAATCGATGAGTTAAAGCTTTCACCCGGTGATAAACTTAGAGTTCCTCTTAGATGTGCTTGTCCTACAAAGAATCAAACAGAGAAAGGTTTCAAGTACCTATTGAGTTACTTAATTTCCTTTGGAGATGATGTTTCTCAAATCAGTGAAAGATTTGGTGTCACCATTGAAACAATTCTTGAAGCTAATAGCCTTTCTTCACAGAAACCAACCATCAATCCTTTTACCACACTTTTGGTTCCCCTTCAAGAAAAGCCATCAAGTTCACAAACGGTTATGACTCCACCGCCTCCGTCTCTGTCGCCATCGCCACCGCCTCCGTCTTCTTCTGGTGGAAGTTCAAGCAAGACTTGGGTCTATGTGGTTGTCGGAGTTGTCGGAGGTGTAGTCTTAGTCTTAGTTTTAGTCCTCTTCTCCATCATTTTCAGGAAGCATTTTATCAGGAAGAAGAAGAAAGGCAATTCTGTGATTGTGTCCAAGAGCTTTGAAGCAATTGAGAAACAACAGGGGAAGAAGTTGGAGGAAGATTCAGAAACATTGTCAGAGATCATATCCGACATAGCACAATCATTCAAGGTTTACAGATTCAAGGAACTGCAGAGTGCAACAAATGATTTCAGTTCCGAATTCTTGATCAAAGGGTCGGTGTATCGCGGCCTTATAAACAGAGATTTAGCTGCAATCAAGAAGATAAACAGAGATGTGTCTAAAGAGGTACAATTGCTGAACAAAGTGAATCATTCTAACGTGATTCGCCTCTCCGGCGTTAGCTTCAACGAGGGACATTGGTATCTTGTTTATGAGTATGCTGCTAATGGACCATTGAGTGATTGTATTTTCATGGAAAATGGACAGTTCTTGAGTTGGAAACAGAGAATAAAAATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCACAGTTTCACTTCTCCACCTTTTATCCACAAGGATTTAAAATGTGACAACATTCTTCTAGACGCTGATTTCAGGGCGAAGATTGCCAACTTCGGCCTCGCCCGGTCGATACAAGGCGAGGAAGACGAATTTTCGATGACAAGGCACATAGTGGGGACAAGAAATTACATGGCTCCTGAGTATTTGCAGAATGGTATAGTGTCTACAAAGCTTGATGTCTACGCATTTGGGGTTATGGTGGTGGAAATACTCTCTGGAAGAGAGGTTGCTGCTATCTACGAGGAATATGACAAGAAGAATTTAGAAGAAATTTTAAGCAGCATAGTTAAAGAGGAAGGTGATCATGGAAAACTAAAGGAATTTATGGATCCGTTATTGAAAGGAAATTATGCAACGGAGCATGCTGTGTTTATTATTGGAATGATTGAAAAATGTATAAAGAAAGATCTAGCTAGTCGACCTTCAATGCAAGACATTGTGTCATCTTTGTCCAAAGCATTGGACTCATTGAACTGGGAATCCTCGGTTAATATCTCAGGATAG 1920 0.4005 MQSFTIIIHVLTLSLLYHFYVILAQQPYIGVATNACSQTLNSNSILGYTCNGLKPSCQSYLTFKSQINYNSVPTISSLLNIDPTQLSKANSVSQNATFEINKLVIVPVNCSCFANQYYQYNTSYKVQSGDNYFIIANNTFEGLSTCQAMKDQNKIDELKLSPGDKLRVPLRCACPTKNQTEKGFKYLLSYLISFGDDVSQISERFGVTIETILEANSLSSQKPTINPFTTLLVPLQEKPSSSQTVMTPPPPSLSPSPPPPSSSGGSSSKTWVYVVVGVVGGVVLVLVLVLFSIIFRKHFIRKKKKGNSVIVSKSFEAIEKQQGKKLEEDSETLSEIISDIAQSFKVYRFKELQSATNDFSSEFLIKGSVYRGLINRDLAAIKKINRDVSKEVQLLNKVNHSNVIRLSGVSFNEGHWYLVYEYAANGPLSDCIFMENGQFLSWKQRIKIALDVATGLDYLHSFTSPPFIHKDLKCDNILLDADFRAKIANFGLARSIQGEEDEFSMTRHIVGTRNYMAPEYLQNGIVSTKLDVYAFGVMVVEILSGREVAAIYEEYDKKNLEEILSSIVKEEGDHGKLKEFMDPLLKGNYATEHAVFIIGMIEKCIKKDLASRPSMQDIVSSLSKALDSLNWESSVNISG 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00055 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Adu01g00055 639 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 5 635 - -
Adu01g00055 639 SUPERFAMILY Protein kinase-like (PK-like) 342 622 IPR011009 -
Adu01g00055 639 CDD LysM 195 233 IPR018392 -
Adu01g00055 639 Pfam LysM domain 192 234 IPR018392 -
Adu01g00055 639 Pfam LysM domain 124 169 IPR018392 -
Adu01g00055 639 ProSiteProfiles LysM domain profile. 188 233 IPR018392 -
Adu01g00055 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 5 635 - -
Adu01g00055 639 Gene3D LysM domain 119 178 IPR036779 -
Adu01g00055 639 ProSiteProfiles LysM domain profile. 122 168 IPR018392 -
Adu01g00055 639 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Adu01g00055 639 ProSiteProfiles Protein kinase domain profile. 297 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00055 639 Gene3D Phosphorylase Kinase; domain 1 327 422 - -
Adu01g00055 639 MobiDBLite consensus disorder prediction 239 263 - -
Adu01g00055 639 Gene3D LysM domain 179 246 IPR036779 -
Adu01g00055 639 SMART LysM_2 123 169 IPR018392 -
Adu01g00055 639 SMART LysM_2 189 234 IPR018392 -
Adu01g00055 639 Pfam Protein kinase domain 377 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00055 639 MobiDBLite consensus disorder prediction 244 262 - -
Adu01g00055 639 SMART serkin_6 363 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00055 Adu-Chr1 901459 903510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00055 1 634 Receptor kinase-like Gene Family AT2G23770 43.438 4.48e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Adu01g00055 Pkinase 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00055 - - aip:107626052 1138.25