Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00029 ATGCTCGCATTCCGGCCATGCTTCTTCAATCCACCACTCTGCCGCCCCATTTCCGTTAAAGTTCTCTCCTTTTTCGCATTTCCTTCTTCTCTTTCCTCTCACATTCTCTCTCTCCCTTTCCCCCATCGCACAATGACCAAACCACCCTCCGCCTTCGACGCTCTCATGTCCGGTGCTCGCGCTGCCGCCGCCGCCGCTGCCAAGAAGAAGAAATCCGAGCAGTCGCAGCAACCAACTGTTTCTTCTCCCAAGAAACGAAAACCTTCACCCTCCACTCTCCCCACTCCAACCTCCACGCTAAACCCTAACGACCCCAAACCCTCCGAAACCGTTCCTACGCCAACGAGTGACCCGCCCAAGCAAGAACCGGAGAAAGAAGGCCCTCCTCCGACCAAGACTCGCCACGTGTCTTCTTCATCTGCCTTGCAGGAGCTGAAGAAGCGCATTCCGCAGCTGAAGGCGAAGCCTTCGAAATTCGATCCTAGCTCAGTGGCTTGTTGGGAGAAGGGCACGCCTGTGCCGTTCTCGTTGCTGGCTTTGGCGCTTGAAATGATTTCTGCGGAACCTGGCAGAATCAAGATGACAGATATTGCGTGCAATTTGATGAAGACTGTGATATACTCTACCCCTGAGGATCTTGTGCCTCTGATTTATCTCTTCGCGAAGAGGCTTGCTCCGGCGCATGAAGGGCTGGAATTGGGAATTGGCGAGACTTCCATTATTAAGGCACTTGCTGAGGCAACTGGAAGTACTGAATCCAAAATCAAGAAGCAGTATCAGGGCGAGGGTGATTTGGGAAGAGTTGCCAAGATATGCCGTTCATCTCAGTCCATGATGCGGAAGCCTGAGGCTCTGACTATTAGGAAAGTTTTCAACACCTTCCGTCTTATTGCCAAGGCAGGAAACAACTTCAATTTTGTATCACATAAACTAACATTATAA 942 0.5127 MLAFRPCFFNPPLCRPISVKVLSFFAFPSSLSSHILSLPFPHRTMTKPPSAFDALMSGARAAAAAAAKKKKSEQSQQPTVSSPKKRKPSPSTLPTPTSTLNPNDPKPSETVPTPTSDPPKQEPEKEGPPPTKTRHVSSSSALQELKKRIPQLKAKPSKFDPSSVACWEKGTPVPFSLLALALEMISAEPGRIKMTDIACNLMKTVIYSTPEDLVPLIYLFAKRLAPAHEGLELGIGETSIIKALAEATGSTESKIKKQYQGEGDLGRVAKICRSSQSMMRKPEALTIRKVFNTFRLIAKAGNNFNFVSHKLTL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00029 313 Gene3D - 150 305 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Adu01g00029 313 Pfam DNA ligase N terminus 174 302 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Adu01g00029 313 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 156 300 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Adu01g00029 313 MobiDBLite consensus disorder prediction 63 143 - -
Adu01g00029 313 PANTHER DNA LIGASE 1 69 300 - -
Adu01g00029 313 MobiDBLite consensus disorder prediction 70 106 - -
Adu01g00029 313 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 69 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00029 Adu-Chr1 547770 551205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00029 1 305 Core DNA Replication Machinery Family AT1G08130 45.455 2.31e-69 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00029 K10747 - adu:107484497 466.848