Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00018 ATGGATCGGGCGGCGGTTACCGTCGGACCCGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGGTCCGTAACATCGGGTCCGGAAACTTCGGTATCGCAAGATTGATGCAGGATAAGCAGACCAAGGAGCTTGTTGCTGTTAAGTACATCGAACGCGGCGACAAGATTGATGAAAATGTCAAGAGAGAAATCATTAATCACAGGTCTTTGAGACACCCTAACATTGTTAGGTTTAAGGAGGTTATTCTAACACCTACGCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTGTTTGAGCGAATCTGCAATGCTGGGCGCTTCTCTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTACTGCCATGCAATGCAAGTTTGTCACCGGGACCTGAAGTTGGAGAACACTTTGCTGGATGGAAGCCCAGCACCACGTTTGAAGATATGCGATTTTGGCTACTCCAAGTCTTCGGTGCTTCATTCACAACCAAAGTCAACAGTTGGTACTCCAGCTTATATAGCTCCAGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGATTGCAGATGTCTGGTCATGTGGAGTAACTTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAGTGAACCAAAGGATTTCAGGAAGACAATTCAGAGAATTCTCAGTGTCCAGTATTCCATTCCAGACTTTGTTCAGATATCTCCTGAATGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCAGAGAGAATCACGATGTCTGAGATCTGGAACCATGAATGGTTTTTGAAGAATCTCCCGGCAGATCTGATGGATGAGAAGATAATGGGCAACCAATTTGAAGAGCCAGACCAACCGATGCAGAGCATTGATACGATCATGCAGATAATCTCAGAAGCTACCATACCAGCAGCCGGGGCCTATTCCTTAGACCAGTTTATGGCAGATAACATTGACATGGATGACGACATAGATGAATTAGAATCCGAATCCGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCTATGTAA 1089 0.4545 MDRAAVTVGPGMDMPIMHDSDRYDLVRNIGSGNFGIARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGAYPFEDPSEPKDFRKTIQRILSVQYSIPDFVQISPECRHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMGNQFEEPDQPMQSIDTIMQIISEATIPAAGAYSLDQFMADNIDMDDDIDELESESELDIDSSGEIVYAM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00018 362 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00018 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Adu01g00018 362 SUPERFAMILY Protein kinase-like (PK-like) 16 314 IPR011009 -
Adu01g00018 362 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00018 362 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Adu01g00018 362 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Adu01g00018 362 Coils Coil 327 347 - -
Adu01g00018 362 PANTHER SERINE/THREONINE KINASE 14 357 - -
Adu01g00018 362 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Adu01g00018 362 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g00018 362 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00018 Adu-Chr1 402043 407811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00018 16 289 CBL-interacting serine-threonine protein kinases AT4G24400 42.756 7.27e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Adu01g00018 Pkinase 3.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00018 K14498 - gmx:100806949 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g00018 01 402043 407811 Adu05g00706 05 8361683 8366637 PCT