Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g00016 ATGTCATCGACGCCTACACCATGCGCGGCATGCAAGTTCCTTCGTCGGGAGTGCACACCGGAGTGCATTTTCGCACCGTACTTCCCAGCGAACAACCCAGAGCGCTTCGAATGCGTCCACCGCGTCTTCGGCGCCAGCAACGTCGGCAATATCCTCAACGCGCTACCTCCATCCCAGCGCGAGGATGCGGCGAAGTCCTTTGCGTTCCAGGCGGAGGCAAGCCTCCGCAGCCCGGTCTATGGCTGCACCCTCCAAGTCCCCAAGAGAGAACCTAGTGCCTCCATGAACCCACAAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTGTCTTCACCTCCTGCCCATTTAGGCCCTCCCTGCGGCCCAAATGTTGTACAGTATTCAGCTCATTTAGGCCCATTTAAGCAAGAGATGTTGCAGGCCCAAGAACTTGACTTGTTGCAGGCCCAAGAACTTGCTGCTGCTAAGCAAGTTAAGATGGAAGTTAAGATGGAACCTGTTGCTGGGATTGAACCTGCTGCGGCTGCGGCGCCCTACGGCGGTGACATCCGTAGAAGTGAAGTGTTTGGCCTCATGCGGCAAATTCAAGTATTGTTTCAACAACAAAAACATCAAATAGGACAACTATTACAACAACATCGACGAGAACTACAAGTATTACAACATCGAATAGAACTACGAGTATTACAACAAAAACAACAACAACAGCACCAGTTTTTCTTCCCTTTCTTTTCTGTTATCAAAGAATATTTCGTTCTAATTGGTGGGGGCATAGTTGCGTTTAATGCATGGTATCGTCAAGAAAACAGTGCAAATAATCCTGTTGTAGCTTTAAAATTGATGTTTGATAACGTTATGCTCACTCCAAAGCAATCACCTTTTGTTTTGGTTTTGTCACAATCTATAGAGAGGGATATCTTCCCGTAA 933 0.4823 MSSTPTPCAACKFLRRECTPECIFAPYFPANNPERFECVHRVFGASNVGNILNALPPSQREDAAKSFAFQAEASLRSPVYGCTLQVPKREPSASMNPQAIQGPFNPQEKPLSSPPAHLGPPCGPNVVQYSAHLGPFKQEMLQAQELDLLQAQELAAAKQVKMEVKMEPVAGIEPAAAAAPYGGDIRRSEVFGLMRQIQVLFQQQKHQIGQLLQQHRRELQVLQHRIELRVLQQKQQQQHQFFFPFFSVIKEYFVLIGGGIVAFNAWYRQENSANNPVVALKLMFDNVMLTPKQSPFVLVLSQSIERDIFP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g00016 310 MobiDBLite consensus disorder prediction 89 116 - -
Adu01g00016 310 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Adu01g00016 310 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 4 238 - -
Adu01g00016 310 MobiDBLite consensus disorder prediction 89 107 - -
Adu01g00016 310 Pfam Lateral organ boundaries (LOB) domain 7 86 IPR004883 -
Adu01g00016 310 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g00016 Adu-Chr1 384497 386214 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g00016 2 83 AS2 family AT1G65620 65.854 1.00e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Adu01g00016 LOB 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g00016 - - ahf:112710769 246.128