Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02203 ATGTCTAACTCTGATGGAACTACCGGCAACGGTAACGGCGCAATCATTGACCCGCAGAGGCAGCAGCAGCAGTCGTCTTCCGGGAACGGTGCTCTCGCCGTCAAGAAGCCGCCGTCTAAGGATCGTCATAGCAAGGTCGACGGTCGAGGTCGCCGTATTCGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACGCGTGAGTTGGGTCACAAATCCGACGGTCAAACTATCGAGTGGCTCCTCCGCCAGGCCGAACCCTCCATCATAGCCGCCACCGGCACCGGCACTACTCCTGCGAGCTTCTCCACCGTTGCGGTCTCCGTACGCGGAGGCGGAGCGGGCAGCGGAGGAGGTTTGACCTCGCTGACGTCGTCTTCTACTACTTCTACTTCTCTTGACCATAAGCCCGCCCTGCTGGGTCCGACGCCCTTCATACTCGGAAAGCGCATACGGACCGCCGATGATGACGCTGCTAAGGATGACGGCGTCTCCGTGGGACCCACTGTTGGGTCGATAGTGGGGCCGACGGCACCAGCTGGGTTGTGGGCACTTCCGGCGAGGCCTGACTTCGGCCAGGTATGGAGTTTTGCTGCAGCTGCGGCCGCTCCTCCGCCTGAGATGGTGGTGCAGCCGGCGGGTGTGTCGGTGTCGCAACAGCAGCATGCTTCATTATTCGTCCACCATCATCAGCAGCAACAAGCCATGGGCGAGGCGTCGGCGGCTAGACTGGGTAATTACCTTCCAGGACATCTGAATTTGCTGGCTTCGTTGTCGAGTGGGCCCGGAAGTTCAGGCCGGAGAGATGATGAGCATCGATAA 825 0.6036 MSNSDGTTGNGNGAIIDPQRQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVAVSVRGGGAGSGGGLTSLTSSSTTSTSLDHKPALLGPTPFILGKRIRTADDDAAKDDGVSVGPTVGSIVGPTAPAGLWALPARPDFGQVWSFAAAAAAPPPEMVVQPAGVSVSQQQHASLFVHHHQQQQAMGEASAARLGNYLPGHLNLLASLSSGPGSSGRRDDEHR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02203 274 MobiDBLite consensus disorder prediction 119 136 - -
Accr9g02203 274 Pfam TCP family transcription factor 39 116 IPR017887 -
Accr9g02203 274 MobiDBLite consensus disorder prediction 1 32 - -
Accr9g02203 274 MobiDBLite consensus disorder prediction 36 51 - -
Accr9g02203 274 MobiDBLite consensus disorder prediction 114 136 - -
Accr9g02203 274 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Accr9g02203 274 MobiDBLite consensus disorder prediction 1 51 - -
Accr9g02203 274 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 250 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02203 Accr-Chr9 47125240 47126064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02203 5 274 TCP Transcription Factor Family AT5G23280 61.172 4.50e-95 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Accr9g02203 TCP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02203 K16221 - qsa:O6P43_020036 357.836