Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02195 ATGGGCAAATCCAGCAAGAAATCAGCTCCTAAAGTTGATTCTGCTCCGGCTGTTGTTCCGCCTTCGATGTCTGCAAAGAAAGGCAAGAGGGAAGCTGAGGATGAACTTGAGAAGCTAGTGAGTGCAAAGAGGCAGAAGAGAGATGAAGTTGCTGATAAGAAGGCGGCCAAGGTGCAGAAAAAGAAGAAAGGAAGTAGTTCAGATGATGATTCTTCATCAGAATCTGAGGAAGACAAGAAAACTGTCACAAAAGCTGTTCTTCCATCAAAGACACAACCTTCTAAGAACGGTGCCCTAAGTGGCCGGGTGAACAGAGGCAAACCAGCTAGTAGCTCCACTTCTGAATCCTCTGATGATGACTCCGATAGTGATGATGCTGGAAAATCCAAGGTTGCCTATGCTGCTGGTAAGAATGGAACTCCTTCAACAAAGAAGAAAGTTGAGTCAAGTGACAGCTCAGATACTGAGGGCAGTTCAGATGAAGAAAATGATGTGAGAACTAAAGTTGCCCCGCTATCCAAGAAGATACCTGTTGCTGAAGCTAAGAAAGTTGAATCAGACTCAGAACCTGACAGCAGCTCTGATGCGGATGATGTCCCTACAAAATCATTCAAGAAGTTGCCTGCTGCTCCTGCCGCAGGCAAAAGTAAACCTGTCAAAAAACTTGAGTCTAGTGATGATGCAGCCTCTGATAGTAGCTCAGATGAAGATGATGATCTTGCAACAAAGAAGTTGCCTGCAACAGTTCCTTCAAAGAAGAAAGTTGAGAGCACTGAAAGCTCTGAAGATGAATCAAGTGAAAGCTCTGATGAAGATAATGGTATGAAGTCTTCTGTCAAAGCAGTTTCCAAGCCTTCCATTGTTTCAAAAAAGGTTGAATCAAGTGAGAGCTCAGAATCTGATAGCAGTAGCTCTGATGAAGACGATGAAGACAACAAAAATGAAAAGGGAGTCCACAGTGCTTCCAGTATGAAGCCAGTAAAGGCTTCTGAGAAGAATTCGAAGTTAAAGGATAGTTCTGACGTGACTGATTCTGATGATGAGGAGGAATCCTCCGACAGTGATTCTGAGGATGAGAAGGAAACTGCTCCTAAGGCTAACGCTAAAGCTGCAGCTGCTTTGAAGACAGCTAAAGAGGAGTCTGGTGAAAGTTCATCTGAAGATGACTCTTCGGAAGATGAGAAAGCTGCTCCCCAGTCTAATATTAAGGCGTCTGCTGGTGTGTGGACCGCAAAAAAGAAGTCTAGTGAATCTTCATCTGAAGATGACTCTTCCGAAGATGAGGATAAGATGGATGTTGACGAGGACAGTGGTTCTGAAGAAAGTGAGGAGGAGCCGCAAAAGAAGTCTGTAAAAGCTATTAAGGAAAGCAGTGAAAGTTCAGAGAGCTCAGATGATAGCGAGGATGACAATGAGACACCCGCCAAGACTCAGAAAAATGCTAAGGATGTGGAGATGGTTGATGCAGCATCAGCAAAGTCAAATGGAAAGAAAGCTCCTAGCACCCCAGCTACTCCAAAAGCACAGAATGCCACGTCAAAGACTCTGTTTGTTGGAAATTTGTCATATAAAGTAGAACAGACTGATGTGGAAAACTTCTTTAAAGATTGTGAAGTGGTTGAGGTCCGTATAGCCTCAGATGAAAATGGCAGGTCTAGAGGCTTTGGACATGTTGAATTTGCCACAGAGGAAGCAGCACAAAAAGCCCTTCAGTTGAATGGGAAAGAATTGCTTCAGCGTCCTGTGAAACTTGATTTCGCTCGTGAAAAGGGAGCATATACCCCCAATAGCGGCAACTGGAGCAATTCATTCCAGAAAGGAGGACAGGCTCAATCTCATACATTATTTGTTAAGGGTTTTGATACATCCCTGGGGGAAGATGAGGTTAGAACAAGCCTGAAAGAGCATTTCAGTTGTGGAGAGATTACAAGGATATCAATTCCTACAGATCATGAGACTGGTGCTTTCAGGGGGTATGCCTACATGGATTTCAAGGATGTTAATGACCTTAACAGAGCTCTAGAATTGAATGGAAGTGAGCTTGGAGATGGATATTATTTGACTGTTGATGAGGCAAGACCTCGAGCTGATAATCAAGGTGCGAGTGGTGGTAGAGGTGGTGGAAGGAGTGGTGGCGGTCAATTTGGGGGAAGAGGAGGAGGTGGTCGATTTGGGGGAAGAGGTGGTGGTGGTCGATTTGGGGGAAGAGGTGGCAGTGGTGAATTTGGGGGAAGAGGTGGCAGAGGTGGTCGTGGAAGAGGTGGCGGCGGCAGGGGACGTGGCACACCCTATAAACCAAGTCTTGCTGCTGCAGGCACAGGGACAAAGACCACATTTGCAGATGAAGATTAA 2352 0.4524 MGKSSKKSAPKVDSAPAVVPPSMSAKKGKREAEDELEKLVSAKRQKRDEVADKKAAKVQKKKKGSSSDDDSSSESEEDKKTVTKAVLPSKTQPSKNGALSGRVNRGKPASSSTSESSDDDSDSDDAGKSKVAYAAGKNGTPSTKKKVESSDSSDTEGSSDEENDVRTKVAPLSKKIPVAEAKKVESDSEPDSSSDADDVPTKSFKKLPAAPAAGKSKPVKKLESSDDAASDSSSDEDDDLATKKLPATVPSKKKVESTESSEDESSESSDEDNGMKSSVKAVSKPSIVSKKVESSESSESDSSSSDEDDEDNKNEKGVHSASSMKPVKASEKNSKLKDSSDVTDSDDEEESSDSDSEDEKETAPKANAKAAAALKTAKEESGESSSEDDSSEDEKAAPQSNIKASAGVWTAKKKSSESSSEDDSSEDEDKMDVDEDSGSEESEEEPQKKSVKAIKESSESSESSDDSEDDNETPAKTQKNAKDVEMVDAASAKSNGKKAPSTPATPKAQNATSKTLFVGNLSYKVEQTDVENFFKDCEVVEVRIASDENGRSRGFGHVEFATEEAAQKALQLNGKELLQRPVKLDFAREKGAYTPNSGNWSNSFQKGGQAQSHTLFVKGFDTSLGEDEVRTSLKEHFSCGEITRISIPTDHETGAFRGYAYMDFKDVNDLNRALELNGSELGDGYYLTVDEARPRADNQGASGGRGGGRSGGGQFGGRGGGGRFGGRGGGGRFGGRGGSGEFGGRGGRGGRGRGGGGRGRGTPYKPSLAAAGTGTKTTFADED 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02195 783 MobiDBLite consensus disorder prediction 147 169 - -
Accr9g02195 783 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 613 745 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 85 116 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 343 357 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 421 441 - -
Accr9g02195 783 SUPERFAMILY RNA-binding domain, RBD 609 721 IPR035979 GO:0003676
Accr9g02195 783 MobiDBLite consensus disorder prediction 26 84 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 178 202 - -
Accr9g02195 783 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 514 589 IPR000504 GO:0003723
Accr9g02195 783 MobiDBLite consensus disorder prediction 695 783 - -
Accr9g02195 783 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 516 582 IPR000504 GO:0003723
Accr9g02195 783 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 615 683 IPR000504 GO:0003723
Accr9g02195 783 Gene3D - 597 740 IPR012677 -
Accr9g02195 783 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 613 694 IPR000504 GO:0003723
Accr9g02195 783 Coils Coil 25 49 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 275 293 - -
Accr9g02195 783 SMART rrm1_1 614 690 IPR000504 GO:0003723
Accr9g02195 783 SMART rrm1_1 515 585 IPR000504 GO:0003723
Accr9g02195 783 FunFam Nucleolin 2 598 741 - -
Accr9g02195 783 SUPERFAMILY RNA-binding domain, RBD 503 605 IPR035979 GO:0003676
Accr9g02195 783 MobiDBLite consensus disorder prediction 495 510 - -
Accr9g02195 783 MobiDBLite consensus disorder prediction 1 510 - -
Accr9g02195 783 Gene3D - 502 594 IPR012677 -
Accr9g02195 783 MobiDBLite consensus disorder prediction 442 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02195 Accr-Chr9 46919127 46927163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02195 515 683 Eukaryotic Initiation Factors Gene Family AT2G23350 30.286 2.78e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02195 K11294 - nnu:104592315 417.542