Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02166 ATGAACATTGAAGTGAAAAAGAAGTATGAATTCTTGGAGTCCTTTAGTGCAATAATGGATGCTCATCTTAGATACTTCAAGCTGGGTTATGACTTACTGAGCCAAATGGAACCTTATATTCACCAGGTATTGACATATGCACAACAATCTAAAGAGCTGGCCAATGCTGAACAAGATAAGCTTGCACAACGAATTCAGGAATATAGAACACAAGCTGAGCTGGACAACTTACGAGCTTCTAGTAATACTGATACTTTATCTGGTGTTGACAGCAGCCGCGTTGTTGGTTTGAACTCATATAAGAACTTTGAAGTAGGGATTCAGTCTGTGCCCCAAGGAGAGGGTCAAACAATTAAGCAAGGCTATCTGCTAAAACGATCGTCAAGATTGCGAGGAGATTGGAAGCGAAGGTTCTTTGTGCTTGACAACCACGGGAGTTTATATTACTATAGAGGGAAGGGAGCCAAGGCAATGGGCTCTCAATCATATAATTTTATCAGATCAACTGAACAAAACAGTGGCATGTTTGGTAGATTCCGCTCTAGGCACAACAGAGCAGCATCACTTAATGAGGAAATTCTGAGTTTCCGTGCGGTTGATCTGTGCACATCAACTATAAAGATGGATGCAGATGATTCAGATCTACGACTTTGCTTTCGCATAATTTCCCCATCCAAAACATACACACTGCAGGCTGAAAATGAAGCTGATAGGATGGACTGGGTAAATAAAATCACTGGAGCTATTACATCGCTTTTCAACTCTCAGTTTCTTCAACAGCCTAATCGGGTTGGATTGCATCAAGAAAATGATAAATCAGCGATTGTTGCTTCATGCTATAGTCAATCGCAGCTTAGCCATGGATCTTTGACTGAAGACATATATTCCAATGAAGTGGAGAGTGTCTCTAAGATTTTATGGGGAATTCCTGGAAATAATAGGTGTGCTGAGTGTTGTGCAACTGAACCAGACTGGGCATCTCTTAACCTTGGGATATTGCTGTGTATTGAATGCTCTGGCGTTCATCGAAATCTTGGAGTTCACATATCAAAGGTGAGATCTATAACATTAGACGTCAAGGTTTGGGAACCTACTGTTCTGGACTTGTTCCGGAACTTGGGTAATGCATATTGTAATTCTATATGGGAGGGTTTGCTACATGACAATGAAAGGAAAAATGAGCCAAATGCCTTTCCAATTAAACCATGCCCTACAGATGCCTTTCAAGAGAAGGAAAAGTACATCCATGCGAAGTACATAGAGAAGTCACTAATCAATAAAGAGACTATACCGGGGAACCCTTCTTTTGCCTTAAGAATATGGCAAGCAGTTCAGGCTTTGAACGTACGGGAAGTGTATCGCCTCATTGTCACTTCAGATACAACTCTGGTAAACACCAAATATGATGATGCGGCTCACCATGCTGAGGCAGAAAATTTGGATTTAAGATGTCGCACTACTGAAAACCAGCAAGATCCTGATAATCCTGTGAGCTGTGTCCAAGGTTGTTCACTGTTGCATCTGGCATGTTATTCTGGCAGTGAACTAATGGTTGAGTTGTTGCTTCAATTTGGTGCGGATATAAATGTGCGTGACTCCCATGGAAAGACTCCCTTGCATCATTGCATTTCTAGAGGAAAAAATCCTTTGGCAAAGCTTCTACTTCGAAGGGGTGCAAGGCCTTCCATTAAAGATGGTGATGGATTCACTGCTCTTGAAAGAGCAATGGAGATGGGAGCAATAACTGATGAAGAGCTATTTATTTTGCTGGCTGAATCCGCTTGA 1785 0.4157 MNIEVKKKYEFLESFSAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKELANAEQDKLAQRIQEYRTQAELDNLRASSNTDTLSGVDSSRVVGLNSYKNFEVGIQSVPQGEGQTIKQGYLLKRSSRLRGDWKRRFFVLDNHGSLYYYRGKGAKAMGSQSYNFIRSTEQNSGMFGRFRSRHNRAASLNEEILSFRAVDLCTSTIKMDADDSDLRLCFRIISPSKTYTLQAENEADRMDWVNKITGAITSLFNSQFLQQPNRVGLHQENDKSAIVASCYSQSQLSHGSLTEDIYSNEVESVSKILWGIPGNNRCAECCATEPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTVLDLFRNLGNAYCNSIWEGLLHDNERKNEPNAFPIKPCPTDAFQEKEKYIHAKYIEKSLINKETIPGNPSFALRIWQAVQALNVREVYRLIVTSDTTLVNTKYDDAAHHAEAENLDLRCRTTENQQDPDNPVSCVQGCSLLHLACYSGSELMVELLLQFGADINVRDSHGKTPLHHCISRGKNPLAKLLLRRGARPSIKDGDGFTALERAMEMGAITDEELFILLAESA 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02166 594 PANTHER CENTAURIN/ARF 2 592 IPR045258 GO:0005096
Accr9g02166 594 SUPERFAMILY PH domain-like 108 262 - -
Accr9g02166 594 Pfam Ankyrin repeats (3 copies) 506 579 IPR002110 GO:0005515
Accr9g02166 594 Gene3D Arf GTPase activating protein 283 430 IPR038508 -
Accr9g02166 594 Gene3D - 116 254 IPR011993 -
Accr9g02166 594 Pfam Putative GTPase activating protein for Arf 303 427 IPR001164 GO:0005096
Accr9g02166 594 Pfam PH domain 118 249 IPR001849 -
Accr9g02166 594 SMART arf_gap_3 300 432 IPR001164 GO:0005096
Accr9g02166 594 SMART ANK_2a 534 563 IPR002110 GO:0005515
Accr9g02166 594 SMART ANK_2a 501 530 IPR002110 GO:0005515
Accr9g02166 594 Gene3D - 468 593 IPR036770 -
Accr9g02166 594 ProSiteProfiles Ankyrin repeat profile. 534 566 IPR002110 GO:0005515
Accr9g02166 594 ProSiteProfiles Ankyrin repeat region circular profile. 534 565 - -
Accr9g02166 594 CDD ArfGap 304 419 - -
Accr9g02166 594 SUPERFAMILY Ankyrin repeat 495 586 IPR036770 -
Accr9g02166 594 SMART PH_update 117 252 IPR001849 -
Accr9g02166 594 Gene3D Arfaptin homology (AH) domain/BAR domain 1 74 IPR027267 -
Accr9g02166 594 ProSiteProfiles Ankyrin repeat region circular profile. 501 532 - -
Accr9g02166 594 ProSiteProfiles Ankyrin repeat profile. 501 533 IPR002110 GO:0005515
Accr9g02166 594 PRINTS HIV Rev interacting protein signature 312 331 IPR001164 GO:0005096
Accr9g02166 594 PRINTS HIV Rev interacting protein signature 354 375 IPR001164 GO:0005096
Accr9g02166 594 PRINTS HIV Rev interacting protein signature 331 348 IPR001164 GO:0005096
Accr9g02166 594 ProSiteProfiles PH domain profile. 116 250 IPR001849 -
Accr9g02166 594 SUPERFAMILY ArfGap/RecO-like zinc finger 300 425 IPR037278 -
Accr9g02166 594 CDD PH_ACAP 119 254 - -
Accr9g02166 594 Coils Coil 51 71 - -
Accr9g02166 594 ProSiteProfiles ARF GTPase-activating proteins domain profile. 300 432 IPR001164 GO:0005096
Accr9g02166 594 SUPERFAMILY BAR/IMD domain-like 3 139 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02166 Accr-Chr9 46501949 46509178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02166 310 419 C2H2 Transcription Factor Family AT4G05330 42.342 2.12e-20 90.9