Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02149 ATGGAAAAACTCCCACTTCTTCAGATTTTTCCACTTATCTTTCTCATCACTTCTCTTTTCTTCCCTATCACTCACCAACTTACAGCTTCACCATCATCCCTCAAGACAGATGCACAGGCTCTTCTCATGTTCAAGAAGACAATCCAGAAGGACCCTGATAGGGTCTTGTCCACGTGGCAGCTCAGCAGAGATCCTTGTACCTGGTATGGAGTTTCCTGCACAGCAAGACGTGTCACTCAGCTTGATCTTAGTGATAAAAATCTGGTTGGGACTTCTTTCACTGCTTTGTCTTCTTTGGATGTGTTGTCTGTTCTGAATTTGCATTTGAACTCTTTCCCTGTAAATTCCACTTCCTTGCTTGACCTTCCTTATAGTTTGACACAGCTTGATCTGTCCTTCACTGGAGTTTCAGGTTCTCTCCCAGAGAATTTTTTCTCCAAGTGTCCTAATCTTGTCGTTATCAATCTTTCTTACAACAACTTGACAGGTCCTGTGCCTGAAAATTTCCTGTACAATTCAAATAAGCTTCAGTCTCTCGATATATCTTCAAACAATTTGACAGGGTCCATATCAAACTTGAAAATTGAGTGCAATTCCTTGTTGTTTCTTGATCTTTCTGGAAACCATTTATCAGATTCCATCCCATTTTCCTTGTCAAACTGTACCAGCCTCAAGACTTTGAATTTGGCACATAATCTGATTTCAGGGGAAATTCCAAAACCTCTGGGGCAGCTTATAGAGCTAGAGACAATTGATCTTTCTTACAATCAGATCACTGGTTGGATTCCTTTTGAGTTGGGAAATATTTGTGCTAGCCTTAAAGATCTAAGATTTTCTTTCAACAACATTTCGGGTTCGATTCCACCTACTTTTTCATCTTGCTCTAGCCTGCAGTATCTTGACATATCAAACAACAATATGTCAGGGCCATTACCAGATAAAATCTTTCAGAACTTACAATCAATTCAGGAAGTGCATTTGGGAAACAATGCTATCTCAGGACCGTTTCCTTCTTCAATATCATCATGCAAAAATTTGAGGATCTTGGACTTGAGCTCTAACAAAATCTCAGGATCCATTCCTCGAGATATATGTCCCGGGGCGGCTTCACTTGAGCAGATTAGAATGCCAGATAATCTCATCTCAGGAGAAATTCCAGCTGAGCTGTCAAAATGTTCACAGTTGAAGACAATTGATTTTAGTCTGAATTATCTCAATGGCTCGATCCCTCCAGAGCTTGGGCAGCTTGAGAACCTTCAGCAGTTGATAGCATGGTTCAATGGGTTAGAAGGAAAAATCCCACCAGAATTAGGTAAATGCAAGAGTCTGAAGGATCTTATACTGAATAACAATCAGCTAAGTGGTGAGATTCCTGTTGAGTTATTCAATTGCAGCAATCTTGAATGGATTTCACTCACAAGCAATGGACTCACCGGTCAAATACCGCGTGCATTCGGGCAGTTGACTCGGTTAGCGGTTTTGCAGCTTGGAAACAACAGCTTGACAGGAGAGATACCAGGAGAACTAGCAAATTGTAGCAGTTTGGTGTGGTTGGACTTAAACAGCAACAAGCTCACTGGAGAGATCCCACCAAGACTTGGCAGGCAGCTTGGAGCGAAATCGTTGTTTGGTATTCTTTCGGGTAACACTTTAGTGTTTGTAAGAAATGTGGGGAATTCATGTAAAGGAGTTGGAGGGTTGTTAGAGTTTTCTGGAATCAGGCCAGAAAGACTTCAGCAGGTGCCAACATTGAGGACATGTGATTTCACCAGATTGTATTCTGGTCCAGTTCTGAGTTATTTCACCAAGTACCAGACTTTGGAGTATCTTGATCTTTCATACAACGAGCTTCGTGGAAGAATCCCCGAAGAATTTGGAGACATGGTGGCCTTACAGGTTCTTGAATTGTCTCACAATCAGTTATCAGGAGAGATCCCTTCATCACTTGGCCAGCTTAAGAATTTAGGTGTCTTTGATGCATCACATAACAGGCTGCAAGGTCATATCCCAGACTCATTCTCAAACCTATCATTTCTGGTGCAGATTGATCTGTCTAACAACGAGTTAACCGGCCAAATCCCGTCTAGAGGACAACTAAGTACACTTCCAGCCAGCCAATATGCAAACAACCCAGGACTTTGTGGCGTTCCACTGTCCGAATGTCAGAGCGATAACAATCAACCAACAGAATATCCAACCACAGATGACAACAAAGGAAGCCATAGAGGAGCAGCTGGATCATGGGCAAATAGTATTGTCATGGGAGTTCTTATTTCTATCGCTTCTGTGTGTATCTTGATCGTGTGGGCGATTGCAATGCGTGCGAGAAGGAGGGAAGCCGAGGAAGTTAAGATGCTTAGCAGCTTGCAGGCATCTCATGCAGCCACAACATGGAAGATTGACAAGGAGAAAGAACCCTTGAGCATTAATGTGGCAACATTTCAAAGACAACTAAGGAAGCTCAAGTTCTCACAATTGATTGAAGCAACTAATGGCTTCTCAGCAGCTAGCCTCATTGGTTGTGGTGGCTTTGGAGAAGTGTTTAGGGCAACACTGAAGGATGGTTCAAGTGTTGCAATAAAAAAACTCATCCGGTTAAGCTGCCAAGGAGATCGGGAATTCATGGCAGAGATGGAAACCTTGGGGAAGATCAAACATAGAAATCTTGTACCTTTATTGGGATACTGTAAAGTTGGTGAAGAGAGACTTCTTGTTTATGAGTACATGGAATATGGAAGCCTTGAAGAAATGCTTCATGGAAGAACAAAGACACGAGATAGGAGAATTCTGACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCAAAAGGACTTTGTTTCCTACATCACAATTGTATCCCACACATAATACACAGAGACATGAAGTCAAGCAATGTGTTGCTTGATCATGAAATGGAGGCTAGAGTTTCGGACTTTGGAATGGCAAGACTAATAAGTGCACTTGACACTCACCTAAGTGTTAGCACACTTGCAGGAACACCCGGCTATGTTCCACCGGAGTACTACCAAAGTTTCCGGTGCACTGCAAAGGGTGATGTGTATTCCTTTGGAGTTGTCATGCTGGAACTTCTTTCCGGGAAACGCCCTACTGATAAGGAGGACTTTGGCGACACTAACTTGGTGGGATGGGCGAAAATGAAGGTACGTGAAGGGAAGCAGAGGGAAGTGATAGATCCTGAGTTGCTTTTGGTGACTAAAGGAACAGATGAAGCAGAAGTTAAAGAGGTGAAAGAGATGATAAGGTATCTAGAGATAACACTACAATGTGTTGATGATCTTGCTTCCAGGAGGCCAAACATGTTGCAGGTAGTGGCCATGCTGAGAGAGTTGATGCTGGGATCGGCCGATGGAAGCAGCAACAGTGCTTGA 3393 0.4288 MEKLPLLQIFPLIFLITSLFFPITHQLTASPSSLKTDAQALLMFKKTIQKDPDRVLSTWQLSRDPCTWYGVSCTARRVTQLDLSDKNLVGTSFTALSSLDVLSVLNLHLNSFPVNSTSLLDLPYSLTQLDLSFTGVSGSLPENFFSKCPNLVVINLSYNNLTGPVPENFLYNSNKLQSLDISSNNLTGSISNLKIECNSLLFLDLSGNHLSDSIPFSLSNCTSLKTLNLAHNLISGEIPKPLGQLIELETIDLSYNQITGWIPFELGNICASLKDLRFSFNNISGSIPPTFSSCSSLQYLDISNNNMSGPLPDKIFQNLQSIQEVHLGNNAISGPFPSSISSCKNLRILDLSSNKISGSIPRDICPGAASLEQIRMPDNLISGEIPAELSKCSQLKTIDFSLNYLNGSIPPELGQLENLQQLIAWFNGLEGKIPPELGKCKSLKDLILNNNQLSGEIPVELFNCSNLEWISLTSNGLTGQIPRAFGQLTRLAVLQLGNNSLTGEIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQVPTLRTCDFTRLYSGPVLSYFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLSECQSDNNQPTEYPTTDDNKGSHRGAAGSWANSIVMGVLISIASVCILIVWAIAMRARRREAEEVKMLSSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQREVIDPELLLVTKGTDEAEVKEVKEMIRYLEITLQCVDDLASRRPNMLQVVAMLRELMLGSADGSSNSA 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02149 1130 SUPERFAMILY L domain-like 570 721 - -
Accr9g02149 1130 Gene3D Transferase(Phosphotransferase) domain 1 909 1126 - -
Accr9g02149 1130 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 281 1117 - -
Accr9g02149 1130 Gene3D Ribonuclease Inhibitor 36 144 IPR032675 -
Accr9g02149 1130 ProSiteProfiles Protein kinase domain profile. 833 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g02149 1130 Gene3D Ribonuclease Inhibitor 166 721 IPR032675 -
Accr9g02149 1130 SUPERFAMILY RNI-like 235 532 - -
Accr9g02149 1130 CDD STKc_IRAK 839 1118 - -
Accr9g02149 1130 Pfam Leucine rich repeat 465 525 IPR001611 GO:0005515
Accr9g02149 1130 Pfam Leucine rich repeat 600 641 IPR001611 GO:0005515
Accr9g02149 1130 Pfam Leucine rich repeat 125 186 IPR001611 GO:0005515
Accr9g02149 1130 Pfam Leucine rich repeat 272 332 IPR001611 GO:0005515
Accr9g02149 1130 SMART LRR_typ_2 245 268 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 513 536 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 488 512 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 441 464 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 294 318 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 416 440 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 628 652 IPR003591 -
Accr9g02149 1130 SMART LRR_typ_2 343 367 IPR003591 -
Accr9g02149 1130 Gene3D - 546 602 - -
Accr9g02149 1130 Pfam Leucine Rich repeat 220 237 IPR001611 GO:0005515
Accr9g02149 1130 Pfam Leucine Rich repeat 342 358 IPR001611 GO:0005515
Accr9g02149 1130 Pfam Protein tyrosine and serine/threonine kinase 837 1114 IPR001245 GO:0004672|GO:0006468
Accr9g02149 1130 FunFam serine/threonine-protein kinase BRI1-like 2 794 908 - -
Accr9g02149 1130 ProSiteProfiles Leucine-rich repeat profile. 175 197 IPR001611 GO:0005515
Accr9g02149 1130 SMART LRR_sd22_2 245 266 - -
Accr9g02149 1130 SMART LRR_sd22_2 652 678 - -
Accr9g02149 1130 SMART LRR_sd22_2 173 195 - -
Accr9g02149 1130 SMART LRR_sd22_2 343 358 - -
Accr9g02149 1130 SMART LRR_sd22_2 294 321 - -
Accr9g02149 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 957 969 IPR008271 GO:0004672|GO:0006468
Accr9g02149 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 360 - -
Accr9g02149 1130 ProSitePatterns Protein kinases ATP-binding region signature. 839 862 IPR017441 GO:0005524
Accr9g02149 1130 Pfam Brassinosteroid receptor island domain 543 601 IPR045381 -
Accr9g02149 1130 SMART serkin_6 833 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g02149 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 566 725 - -
Accr9g02149 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 195 272 - -
Accr9g02149 1130 FunFam serine/threonine-protein kinase BRI1-like 2 909 1126 - -
Accr9g02149 1130 Gene3D Phosphorylase Kinase; domain 1 791 908 - -
Accr9g02149 1130 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Accr9g02149 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 365 553 - -
Accr9g02149 1130 FunFam serine/threonine-protein kinase BRI1-like 2 36 146 - -
Accr9g02149 1130 ProSiteProfiles Leucine-rich repeat profile. 345 367 IPR001611 GO:0005515
Accr9g02149 1130 SUPERFAMILY Protein kinase-like (PK-like) 814 1115 IPR011009 -
Accr9g02149 1130 SUPERFAMILY L domain-like 35 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02149 Accr-Chr9 46280456 46283848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02149 7 1118 Receptor kinase-like Gene Family AT1G55610 48.309 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr9g02149 PK_Tyr_Ser-Thr 5.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02149 - - gmx:100789959 1877.83