Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02135 ATGTCTCTCTCAAAACCACCACTACCCTCTGGTATCTCATTTGCTTCTCGCTTTGCCCCACACTCTCTTCCCAGGTGGAGCATGCCGGAGAAGGCGATGCCGAAGGAGGTGGCGTACCAGAACATCCACGATGAGCTCCAGCTGGACGGCAATCCGAAACTGAACTTGGCGTCGTTCGTGACGACTTCCATGGAGGAAGAATGCAACAAGCTCATCATGGAATCCATTAACAAGAACTATGTTGACATGGACGAGTACCCTATCACCACTGACCTTCACAATCGATGCGTGAACATGCTGGCAAGATTGTTCAATGCTCCGATGGAAGAAGGTGAATGCGGTGTGGGAGTGGGGACGGTTGGATCGTCGGAAGCGATAATGCTGGCGGGGTTGGCTTTCAAGAAGAGATGGCAAAACATGAGGAGGGCTCAAGGCAAGCCTTTCGACAAGCCTAACATTGTAACTGGCTCTAATGTTCAGGTGTGTTGGGAGAAATTTGCTAGGTATTTTGAGGTGGAGTTGAAGCAAGTGACGGTGAGGGAAGGGTACTACGTGATGGATCCACAAAGAGCAGTGGAAATGGTAGACGAAAACACAATCTGTGTTGCAGCAATTCTGGGTTCTACTTACAATGGTGAGTTTGAAGATGTTAAGCTCTTGAACGACCTTCTTCTACAAAAGAACAAGCAAATAGGGTGGGAGACACCGATTCATGTGGATGCGGCAAGTGGAGGGTTTATTGCGCCATTTTTGTATGAAGAGTTAGAGTGGGATTTTAGGCTGCCGTTGGTGAAGAGTATCAATGTGAGTGGCCACAAGTATGGATTGGTGTATGCTGGTATTGGTTGGGTTCTGTGGAGGACCAAACAAGACTTGCCTCAAGATCTTGTCTTCCACATTAATTATCTTGGAGCTGATCAGCCCACTTTCACCCTCAATTTTTCTAAGGGTTCTAGCCAGATTATTGCCCAATATTATCAGCTAATTCACCTAGGCAAAGAGGGCTACCGTAATGTGATGGAGAACTGTAGAGAAAACGCAATGGTTGTAAAGGAAGGAATAGTAAACACAGGATGCTTCAACATACTTTCCAAGGACAATGGCGTTCCTGTGGTGGCATTCTCCCTCAAGGACAGAAGCCATCACGACGAGTTCAAGATCTCAGCCATGCTCCGCCGTCATGGGTGGATCGTGCCAGCGTACCCGTTGCCTCCCGGTGCTGACCACATCACCGTGCTGCGTGTCGTCATCAGGGCCGATTTCTCTCGCACATTGGCCGAAAGTCTTGTGATGGACATCACAAATGTTCTCCGTCAACTTGAAATGCTTCCTCATCAATACATTAACGATCACAAGGCAACTATGACTAATGATCACAATAATATTGAAGGAGTGAAGAAGAGGATTACTTCGTCGGAGGTCCGAAGAAAAATCATTGCTCAAGAAGCCAAAAGGCGCCAAAAAATCTTGGCTGCTTAG 1479 0.4746 MSLSKPPLPSGISFASRFAPHSLPRWSMPEKAMPKEVAYQNIHDELQLDGNPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMLARLFNAPMEEGECGVGVGTVGSSEAIMLAGLAFKKRWQNMRRAQGKPFDKPNIVTGSNVQVCWEKFARYFEVELKQVTVREGYYVMDPQRAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQIGWETPIHVDAASGGFIAPFLYEELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKQDLPQDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIHLGKEGYRNVMENCRENAMVVKEGIVNTGCFNILSKDNGVPVVAFSLKDRSHHDEFKISAMLRRHGWIVPAYPLPPGADHITVLRVVIRADFSRTLAESLVMDITNVLRQLEMLPHQYINDHKATMTNDHNNIEGVKKRITSSEVRRKIIAQEAKRRQKILAA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02135 492 Pfam Pyridoxal-dependent decarboxylase conserved domain 29 377 IPR002129 GO:0016830|GO:0019752|GO:0030170
Accr9g02135 492 PANTHER GLUTAMATE DECARBOXYLASE 13 485 IPR010107 GO:0004351|GO:0006536|GO:0030170
Accr9g02135 492 Gene3D - 357 444 - -
Accr9g02135 492 NCBIfam glutamate decarboxylase 14 440 IPR010107 GO:0004351|GO:0006536|GO:0030170
Accr9g02135 492 Gene3D - 10 61 - -
Accr9g02135 492 Gene3D - 62 355 IPR015421 GO:0003824
Accr9g02135 492 FunFam Glutamate decarboxylase 11 61 - -
Accr9g02135 492 FunFam Glutamate decarboxylase 62 356 - -
Accr9g02135 492 FunFam Glutamate decarboxylase 357 444 - -
Accr9g02135 492 SUPERFAMILY PLP-dependent transferases 16 440 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02135 Accr-Chr9 45991018 45994234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02135 13 467 Calmodulin-binding Proteins AT5G17330 76.356 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02135 K01580 - gmx:100782330 763.837