Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02130 ATGAACCGCGATATGTGTCGCTGGATACTAGAGTTTCTCCTCTCGAGTTCTGTTGTTCCAGATACAATCGCCAAGAAGGTATGCACTGTTTTGCCTCTCCCTGGTTTCGATTCGCGGCTCGGGAAAATGTTGGCTCTCAAGTCTATTGAATCGGAGGTGGCTAAGGCATTGTTTACAGAAACCTCATTAGAATGTCTAGAGCTCATTGAAGAAATCGACTGTCTTGATGGCACTGCAATCACACAAGCGATGAAGGAGGCTTATTGTGCTGTGGCCGTGGAGTGCAGTGTTAGGTACCTTGATCCATATCCAGGTAAGAACGCCCGCGGCTTGTTTGACGTTGCTGTTAATAAGACATGGAGGGGCCGAATTCGGAAAATGATGGAGGCGATGGTGTTGTCGTCGTCAGGGAAGATATGTCACTTACTTACGCCTGAGTTGATTGAGTGGAAGGACGTCATTGAGTCTGCACGTTGGGACGCAGAGGTATGCGAGAGATTGACGAACATGAATACCAGAAAAAATGCCCTCGATAAGGTTAGGGCTTATCTGCAGGAAACTAGGGCATCCATGGGCCCTTCTTATCTTGAGTCAGCAGCTTTATTGTCTGAAGACGTGGGCTTGAGAAGTTCAAGTGGGGATAAGATTGGTGACGCAGAGCTTGCTGCTAGTATACCCAATGAAGGTTGTGATAAGAGTGTTTCTGAATCTGCCTTGGTCATTGATCAGATGAATATACGTGAAGAAAGTTTACATTGTTCGACTAACAGGATTAAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGCAAAATGCTGCAATCTGCATGGAGAAGGCGCCAGAGGCAGGTGGGAATCAAGATAGTGAGCAATTGGGTGAGACTGACTTGACTCAAAGGATAAATGAAGGATCTGAATTAGCAACAAAGGCTATGCATCACGAGCCTCCTTCTGAAAATCAGGGTACCGCTGTAAATGTACCGGAACAAAATACTTGCTGGAGCATGGTGCCATATCAACCTATCGATGATAATTTAAAGGAACAGCCATCTGCTAATCACAGTAATTCTCGACATCCCGGCTGGATGGAACGAGATAGTACTGCCCATACTTACGAGTGGGGCGATTCATTTAATGACTTGCCTGGGGGAAGCCCCAACAAAAGGAGGAAAAAAGTGAAATGGAGTTCTGAAGAAGAGGATGCATTAAGGGAGGGTGTAAAGAAGATTGGCAGAGGAAGCTGGAAGCAAATCCTAAGATTTCACAGCGAGATATTTAACAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTGGCCTTGA 1344 0.4554 MNRDMCRWILEFLLSSSVVPDTIAKKVCTVLPLPGFDSRLGKMLALKSIESEVAKALFTETSLECLELIEEIDCLDGTAITQAMKEAYCAVAVECSVRYLDPYPGKNARGLFDVAVNKTWRGRIRKMMEAMVLSSSGKICHLLTPELIEWKDVIESARWDAEVCERLTNMNTRKNALDKVRAYLQETRASMGPSYLESAALLSEDVGLRSSSGDKIGDAELAASIPNEGCDKSVSESALVIDQMNIREESLHCSTNRIKEGLVVSDGSALQNAAICMEKAPEAGGNQDSEQLGETDLTQRINEGSELATKAMHHEPPSENQGTAVNVPEQNTCWSMVPYQPIDDNLKEQPSANHSNSRHPGWMERDSTAHTYEWGDSFNDLPGGSPNKRRKKVKWSSEEEDALREGVKKIGRGSWKQILRFHSEIFNKAGRTEVDLKDKWRNLTRWP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02130 447 SUPERFAMILY Homeodomain-like 389 445 IPR009057 -
Accr9g02130 447 Gene3D - 385 446 - -
Accr9g02130 447 Pfam Myb-like DNA-binding domain 392 443 IPR001005 -
Accr9g02130 447 MobiDBLite consensus disorder prediction 385 404 - -
Accr9g02130 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 387 447 IPR017930 -
Accr9g02130 447 SMART sant 391 446 IPR001005 -
Accr9g02130 447 ProSiteProfiles Myb-like domain profile. 387 444 IPR001005 -
Accr9g02130 447 PANTHER MYB TRANSCRIPTION FACTOR 1 445 - -
Accr9g02130 447 MobiDBLite consensus disorder prediction 374 404 - -
Accr9g02130 447 CDD SANT_TRF 393 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02130 Accr-Chr9 45957708 45960836 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02130 395 443 Single Myb Histone (SMH) Gene Family AT1G15720 61.224 1.31e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr9g02130 Myb_DNA-binding 1.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02130 - K11111 pcin:129298725 426.787