Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02129 ATGAACCGCGATATGTGTCGCTGGATACTAGAGTTTCTCCTCTCGAGTTCTGTTGTTCCAGATACAATCGCCAAGAAGGTATGCACTGTTTTGCCTCTCCCTGGTTTCGATTCGCGGCTCGGGAAAATGTTGGCTCTCAAGTCTATTGAATCGGAGGTGGCTAAGGCATTGTTTACAGAAACCTCATTAGAATGTCTAGAGCTCATTGAAGAAATCGACTGTCTTGATGGCACTGCAATCACACAAGCGATGAAGGAGGCTTATTGTGCTGTGGCCGTGGAGTGCAGTGTTAGGTACCTTGATCCATATCCAGGTAAGAACGCCCGCGGCTTGTTTGACGTTGCTGTTAATAAGACATGGAGGGGCCGAATTCGGAAAATGATGGAGGCGATGGTGTTGTCGTCGTCAGGGAAGATATGTCACTTACTTACGCCTGAGTTGATTGAGTGGAAGGACGTCATTGAGTCTGCACGTTGGGACGCAGAGGTATGCGAGAGATTGACGAACATGAATACCAGAAAAAATGCCCTCGATAAGGTTAGGGCTTATCTGCAGGAAACTAGGGCATCCATGGGCCCTTCTTATCTTGAGTCAGCAGCTTTATTGTCTGAAGACGTGGGCTTGAGAAGTTCAAGTGGGGATAAGATTGGTGACGCAGAGCTTGCTGCTAGTATACCCAATGAAGGTTGTGATAAGAGTGTTTCTGAATCTGCCTTGGTCATTGATCAGATGAATATACGTGAAGAAAGTTTACATTGTTCGACTAACAGGATTAAGGAGGGTTTAGTTGTGTCTGATGGAAGTGCATTGCAAAATGCTGCAATCTGCATGGAGAAGGCGCCAGAGGCAGGTGGGAATCAAGATAGTGAGCAATTGGGTGAGACTGACTTGACTCAAAGGATAAATGAAGCAATTCGAAAGGGCAAGATGCCTCTTGAAGATAATCATGATGTGCCCTCTACACGTAGAGGAGTTATAATTATTGATTCTGGGAAAGTAGGGCCAGCGACAGTTTGTAGCAAAGATCACAATGCATCTAACATTCAAGCTGAAAGAGTTCAGAAATCTCTTGCATCAAGTTCTTTGGAGATGCAACCATTGGTGAAGGATCCTCTTCCTGATGCATTACATAAATCTGACCTTGTAGGATCTGAATTAGCAACAAAGGCTATGCATCACGAGCCTCCTTCTGAAAATCAGGGTACCGCTGTAAATGTACCGGAACAAAATACTTGCTGGAGCATGGTGCCATATCAACCTATCGATGATAATTTAAAGGAACAGCCATCTGCTAATCACAGTAATTCTCGACATCCCGGCTGGATGGAACGAGATAGTACTGCCCATACTTACGAGTGGGGCGATTCATTTAATGACTTGCCTGGGGGAAGCCCCAACAAAAGGAGGAAAAAAGTGAAATGGAGTTCTGAAGAAGAGGATGCATTAAGGGAGGGTGTAAAGAAGATTGGCAGAGGAAGCTGGAAGCAAATCCTAAGATTTCACAGCGAGATATTTAACAAGGCAGGAAGAACAGAAGTTGATTTGAAGGATAAATGGAGAAATTTGACACGGTGGCCTTGA 1581 0.4485 MNRDMCRWILEFLLSSSVVPDTIAKKVCTVLPLPGFDSRLGKMLALKSIESEVAKALFTETSLECLELIEEIDCLDGTAITQAMKEAYCAVAVECSVRYLDPYPGKNARGLFDVAVNKTWRGRIRKMMEAMVLSSSGKICHLLTPELIEWKDVIESARWDAEVCERLTNMNTRKNALDKVRAYLQETRASMGPSYLESAALLSEDVGLRSSSGDKIGDAELAASIPNEGCDKSVSESALVIDQMNIREESLHCSTNRIKEGLVVSDGSALQNAAICMEKAPEAGGNQDSEQLGETDLTQRINEAIRKGKMPLEDNHDVPSTRRGVIIIDSGKVGPATVCSKDHNASNIQAERVQKSLASSSLEMQPLVKDPLPDALHKSDLVGSELATKAMHHEPPSENQGTAVNVPEQNTCWSMVPYQPIDDNLKEQPSANHSNSRHPGWMERDSTAHTYEWGDSFNDLPGGSPNKRRKKVKWSSEEEDALREGVKKIGRGSWKQILRFHSEIFNKAGRTEVDLKDKWRNLTRWP 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02129 526 MobiDBLite consensus disorder prediction 464 482 - -
Accr9g02129 526 CDD SANT_TRF 472 524 - -
Accr9g02129 526 PANTHER MYB TRANSCRIPTION FACTOR 1 524 - -
Accr9g02129 526 Pfam Myb-like DNA-binding domain 471 522 IPR001005 -
Accr9g02129 526 MobiDBLite consensus disorder prediction 453 482 - -
Accr9g02129 526 SUPERFAMILY Homeodomain-like 468 524 IPR009057 -
Accr9g02129 526 Gene3D - 464 525 - -
Accr9g02129 526 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 466 526 IPR017930 -
Accr9g02129 526 ProSiteProfiles Myb-like domain profile. 466 523 IPR001005 -
Accr9g02129 526 SMART sant 470 525 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02129 Accr-Chr9 45957708 45960836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02129 474 522 Single Myb Histone (SMH) Gene Family AT1G15720 61.224 1.46e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr9g02129 Myb_DNA-binding 1.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02129 - K11111 pcin:129285243 631.713