Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02125 ATGTCTGCTGCTTCCTCGTCTTCACCGTTCTTCGGAATCACAGAAGAAAACCCAATTCTTCAGATGACACAACAACAACAACATCATCAATCCTCTACAGCTGCTTCCTCGACTTCTCCAAACACACTTGTTCCTCAAAAGAAACGAAGAAATCAACCTGGAACACCAAATCCAGATGCGGAGGTGATAGCTCTATCTCCAAAGACATTAATGGCGACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTTCAAAGAGAGCAGAACCTGCAACTTCACAGAAGAGGACACAACCTACCATGGAAGCTAAAGCAGAAGACAAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGTGTCCACCATGACCCTTCTAGAGCTCTCGGTGACCTCACCGGCATTAAGAAACACTACTCGAGAAAACACGGCGAGAAGAAGTGGAAATGCGAAAAGTGCTCGAAGAAATACGCCGTTCAGTCTGATTGGAAAGCTCATTCTAAGACTTGTGGTACCAGGGAATACAGATGTGACTGTGGCACTCTCTTCTCCAGACGTGACAGTTTCATCACTCACAGAGCCTTCTGTGATGCCCTATCTCAAGAGAGTGCAAGAAACCCTACGAGCTTAAACCCTATGGCCACTCATAATCTTTATGGCACAAACCACCATATGAGCTTAGGTCTCTCTCATCATCATCAACAACTTTCTGGTTCCTCACTGTCATCTCACCACCTTCATTTTCATCATCAAAACCCGAATACCACCGGTCTCTTGCGTCTAGGAGGATCTGGCAATAACAACAACAATAATAATAATGCAGCAAAATTTGAGCCTACGAGCTTAATCTCACCCTCATCATCCTCAAACCCCAATTCAATGCCCAATAATTCCTCAGCTTTTTTCATGTCAGATCCAATCCCTAACCAAGGATTTCAGCATCATCAGCAAGCATTTTCTTCTTCAGGCAACAAGGCTTCGTCTTTGCATGGTCTCATGCAGCTTCCTGATCTTCAAGGAAACCCTAATGATAACGACAGTTCCTCCAACAATCCTTTCAATCTAGGGTTCTTCCCTAATAACACAATGATCACACCTGATCAGTTCAATAGCCCTATTGGGTCAGGTTTAGCTTCGTCAGTGCTGTTCAGCAACTCAATACAGCACGCTGACGAGGTTTCTCAGGCGGCGGCACATATGTCGGCAACTGCATTGCTTCAGAAGGCTGCTCAAATGGGCTCCACCACGACTACACCGCCGCCGAATAATAACAGTTCTTCCTCGTTACTCAGAAGAATGGGTGGTTCATCAGCCAATAATAATGGTGGTGGTGGTAAATCAGATAATCTTGTCGCTTTCGGAAACGACGGTACGGAGAATGATCACCACCATCATCTTCGAGGGTTGATGAACTCACTTGCTAATGGGAATGCTTCGATATTTGGGAATGTGCAAGGAGGGAATGAGCAGGGAAATAGTCTGCAACAGAATCTGGGAGTGGGATTCGGAGGTTCTGATAAGTTAACGTTAGACTTTTTAGGTGTCGGAGGAATGGTGAGGAACATGAATAATGGTGGCTTTTCGTCGTCACAGAGAGAAGCTCAACAACAACATCAACATGGAAGCATCAATGTTATGAGTTCTTTGGAACCTCCGCCCGGACAGCATCAACAGCAAGCAAGCCAAAGTTTCAGAAGCACGACATCGTTGCAATGA 1728 0.452 MSAASSSSPFFGITEENPILQMTQQQQHHQSSTAASSTSPNTLVPQKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALSQESARNPTSLNPMATHNLYGTNHHMSLGLSHHHQQLSGSSLSSHHLHFHHQNPNTTGLLRLGGSGNNNNNNNNAAKFEPTSLISPSSSSNPNSMPNNSSAFFMSDPIPNQGFQHHQQAFSSSGNKASSLHGLMQLPDLQGNPNDNDSSSNNPFNLGFFPNNTMITPDQFNSPIGSGLASSVLFSNSIQHADEVSQAAAHMSATALLQKAAQMGSTTTTPPPNNNSSSSLLRRMGGSSANNNGGGGKSDNLVAFGNDGTENDHHHHLRGLMNSLANGNASIFGNVQGGNEQGNSLQQNLGVGFGGSDKLTLDFLGVGGMVRNMNNGGFSSSQREAQQQHQHGSINVMSSLEPPPGQHQQQASQSFRSTTSLQ 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02125 575 MobiDBLite consensus disorder prediction 22 61 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 413 450 - -
Accr9g02125 575 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 538 IPR031140 -
Accr9g02125 575 SUPERFAMILY beta-beta-alpha zinc fingers 75 172 IPR036236 -
Accr9g02125 575 Gene3D Classic Zinc Finger 130 209 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 265 303 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 22 53 - -
Accr9g02125 575 SMART c2h2final6 117 147 IPR013087 -
Accr9g02125 575 SMART c2h2final6 76 98 IPR013087 -
Accr9g02125 575 SMART c2h2final6 152 172 IPR013087 -
Accr9g02125 575 FunFam protein indeterminate-domain 12-like 55 123 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 527 575 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 322 356 - -
Accr9g02125 575 FunFam protein indeterminate-domain 5, chloroplastic-like 130 209 - -
Accr9g02125 575 Pfam Zinc-finger double-stranded RNA-binding 76 98 IPR022755 -
Accr9g02125 575 MobiDBLite consensus disorder prediction 342 356 - -
Accr9g02125 575 MobiDBLite consensus disorder prediction 413 468 - -
Accr9g02125 575 Gene3D Classic Zinc Finger 55 124 - -
Accr9g02125 575 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Accr9g02125 575 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 98 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02125 Accr-Chr9 45920214 45924855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02125 71 527 C2H2 Transcription Factor Family AT2G02080 52.878 4.33e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr9g02125 zf-C2H2_jaz 3.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02125 K25870 - gmx:102663407 526.554