Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02124 ATGATTGAGGAATCAGAAACGAAAGGGCTAAATTTTATGCACAACAGCCAGACACATAACATGATAAGTGTAGATTCGCTTGACTTTTCCCAAGAACACATCATGTCTGCTGCTTCCTCGTCTTCACCGTTCTTCGGAATCACAGAAGAAAACCCAATTCTTCAGATGACACAACAACAACAACATCATCAATCCTCTACAGCTGCTTCCTCGACTTCTCCAAACACACTTGTTCCTCAAAAGAAACGAAGAAATCAACCTGGAACACCAAATCCAGATGCGGAGGTGATAGCTCTATCTCCAAAGACATTAATGGCGACAAACAGGTTCATATGTGAGGTATGCAACAAAGGGTTTCAAAGAGAGCAGAACCTGCAACTTCACAGAAGAGGACACAACCTACCATGGAAGCTAAAGCAGAAGACAAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGTGTCCACCATGACCCTTCTAGAGCTCTCGGTGACCTCACCGGCATTAAGAAACACTACTCGAGAAAACACGGCGAGAAGAAGTGGAAATGCGAAAAGTGCTCGAAGAAATACGCCGTTCAGTCTGATTGGAAAGCTCATTCTAAGACTTGTGGTACCAGGGAATACAGATGTGACTGTGGCACTCTCTTCTCCAGACGTGACAGTTTCATCACTCACAGAGCCTTCTGTGATGCCCTATCTCAAGAGAGTGCAAGAAACCCTACGAGCTTAAACCCTATGGCCACTCATAATCTTTATGGCACAAACCACCATATGAGCTTAGGTCTCTCTCATCATCATCAACAACTTTCTGGTTCCTCACTGTCATCTCACCACCTTCATTTTCATCATCAAAACCCGAATACCACCGGTCTCTTGCGTCTAGGAGGATCTGGCAATAACAACAACAATAATAATAATGCAGCAAAATTTGAGCCTACGAGCTTAATCTCACCCTCATCATCCTCAAACCCCAATTCAATGCCCAATAATTCCTCAGCTTTTTTCATGTCAGATCCAATCCCTAACCAAGGATTTCAGCATCATCAGCAAGCATTTTCTTCTTCAGGCAACAAGGCTTCGTCTTTGCATGGTCTCATGCAGCTTCCTGATCTTCAAGGAAACCCTAATGATAACGACAGTTCCTCCAACAATCCTTTCAATCTAGGGTTCTTCCCTAATAACACAATGATCACACCTGATCAGTTCAATAGCCCTATTGGGTCAGGTTTAGCTTCGTCAGTGCTGTTCAGCAACTCAATACAGCACGCTGACGAGGTTTCTCAGGCGGCGGCACATATGTCGGCAACTGCATTGCTTCAGAAGGCTGCTCAAATGGGCTCCACCACGACTACACCGCCGCCGAATAATAACAGTTCTTCCTCGTTACTCAGAAGAATGGGTGGTTCATCAGCCAATAATAATGGTGGTGGTGGTAAATCAGATAATCTTGTCGCTTTCGGAAACGACGGTACGGAGAATGATCACCACCATCATCTTCGAGGGTTGATGAACTCACTTGCTAATGGGAATGCTTCGATATTTGGGAATGTGCAAGGAGGGAATGAGCAGGGAAATAGTCTGCAACAGAATCTGGGAGTGGGATTCGGAGGTTCTGATAAGTTAACGTTAGACTTTTTAGGTGTCGGAGGAATGGTGAGGAACATGAATAATGGTGGCTTTTCGTCGTCACAGAGAGAAGCTCAACAACAACATCAACATGGAAGCATCAATGTTATGAGTTCTTTGGAACCTCCGCCCGGACAGCATCAACAGCAAGCAAGCCAAAGTTTCAGAAGCACGACATCGTTGCAATGA 1830 0.4481 MIEESETKGLNFMHNSQTHNMISVDSLDFSQEHIMSAASSSSPFFGITEENPILQMTQQQQHHQSSTAASSTSPNTLVPQKKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALSQESARNPTSLNPMATHNLYGTNHHMSLGLSHHHQQLSGSSLSSHHLHFHHQNPNTTGLLRLGGSGNNNNNNNNAAKFEPTSLISPSSSSNPNSMPNNSSAFFMSDPIPNQGFQHHQQAFSSSGNKASSLHGLMQLPDLQGNPNDNDSSSNNPFNLGFFPNNTMITPDQFNSPIGSGLASSVLFSNSIQHADEVSQAAAHMSATALLQKAAQMGSTTTTPPPNNNSSSSLLRRMGGSSANNNGGGGKSDNLVAFGNDGTENDHHHHLRGLMNSLANGNASIFGNVQGGNEQGNSLQQNLGVGFGGSDKLTLDFLGVGGMVRNMNNGGFSSSQREAQQQHQHGSINVMSSLEPPPGQHQQQASQSFRSTTSLQ 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02124 609 Pfam Zinc-finger double-stranded RNA-binding 110 132 IPR022755 -
Accr9g02124 609 Gene3D Classic Zinc Finger 164 243 - -
Accr9g02124 609 MobiDBLite consensus disorder prediction 356 390 - -
Accr9g02124 609 SUPERFAMILY beta-beta-alpha zinc fingers 109 206 IPR036236 -
Accr9g02124 609 MobiDBLite consensus disorder prediction 299 337 - -
Accr9g02124 609 MobiDBLite consensus disorder prediction 376 390 - -
Accr9g02124 609 MobiDBLite consensus disorder prediction 447 502 - -
Accr9g02124 609 Gene3D Classic Zinc Finger 89 158 - -
Accr9g02124 609 MobiDBLite consensus disorder prediction 447 484 - -
Accr9g02124 609 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 57 572 IPR031140 -
Accr9g02124 609 MobiDBLite consensus disorder prediction 56 95 - -
Accr9g02124 609 FunFam protein indeterminate-domain 5, chloroplastic-like 164 243 - -
Accr9g02124 609 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 132 IPR013087 -
Accr9g02124 609 MobiDBLite consensus disorder prediction 56 87 - -
Accr9g02124 609 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Accr9g02124 609 MobiDBLite consensus disorder prediction 561 609 - -
Accr9g02124 609 FunFam protein indeterminate-domain 12-like 89 157 - -
Accr9g02124 609 SMART c2h2final6 151 181 IPR013087 -
Accr9g02124 609 SMART c2h2final6 110 132 IPR013087 -
Accr9g02124 609 SMART c2h2final6 186 206 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02124 Accr-Chr9 45919755 45924855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02124 105 561 C2H2 Transcription Factor Family AT2G02080 52.878 7.77e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr9g02124 zf-C2H2_jaz 3.8e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02124 K25870 - gmx:102663407 526.554