Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02103 ATGGCTGCTTCCAAGGCGTTAATGGCTTCCTTAACCCACCTTCGGCCACTAACATGCGCCGCTTCTGTGTCAAAATCTTATCCTATGCGACTTGTGCCCCAACCACCCGACCTCATCAAATGGGTTCGGAAACAAGGCGGTTTCGTGCACACGGCGGTGAAGATAGCACAAGATGAGTCCAAAGGCCTTGGACTTATGGCTTCGGAAGAAATACCTACAGGCAGTGACCTTATTGTTCTTCCGCATCACCTACCCTTGAAGTTCGGCTCTCTTGAATCGAACAATGAAGATGAGCTTGATTCTGTGTTAGTTAATTTAGCCCGCCATGTTCCTGAGGAACTGTGGGCTATGAAACTGGGTTTGAAGCTTCTGCAAGAAAGAGCAAAAGTGGGATCGTTTTGGTGGCCATATGTCAGCAATCTCCCGGAAACATTCAGTGTGCCTATCTTCTTTCCAGGGCAGGATATAAAGAACTTGCAATATGCTCCACTGCTTCACCAGGTAAACAAAAGATGTCGTTTTCTTCTTGATTTTGAGCAAGAGTGCTGGCGTGCCCTTGACAATCTGAAACCAGATAAGCATCCTTTCGGTGGACAAGAAGTAGATGCATCTGCACTTGGATGGGCAATGTCAGCAGTCTCATCTAGGGCATTCCGGTTATATGGTGACAAGCGTCCAGATGGGGCCCACACAGAAATACCAATGATGCTTCCTCTTATTGATATGTGCAATCATAGTTTCAATCCAAATGCCCGAATTGTTCAGGAAAAAGATAATGGTACAATGAAGATGCTAGTAAAGGTCGTGGCTGATACAGAAATCAAACAAGATGATCCTTTATTACTCAATTATGGCTTTTTAAGCAATGATTTTTTCCTTCTTGATTATGGATTTGTGGTACCGTCAAGTCCTTATGACTGTGTTGAGCTCAAATATGACAGTGCATTTTTGGATGCTGCAAGCATGGCAGCTGGGGTTTTTTCTCCCAGCTTCTCGGCACCTGCTTCATGGCAGGAGCAAGTTTTATGTCAACTAAATCTAGCTGGAGAAGCTCCTGATCTCAAGGTAACCTTAGGTGGTCGAGAAATAGTAGATGGCCGGCTTTTGGCAGCACTGAGAGTACTTCTTACAAGTGACGTAGAGGCCGTGCAGAACTGTGACCTTAACACACTCAAGTCTCTAACTGCTGAAGCTCCTCTTGGTATTGCAAATGAAGTGGCGGCCCTGCGAACAACAATTGCTTTGTGTGTCATCGCATTGGGGCACTTCCCCACTAAGATAATGGATGATGAGTCATTATTGAAACAGGGTGCTTCAGGGTCAACCGAGCTAGCCATTCAGTTCAGGATTCAAAAGAAATCTGTGATTATAGATGTGATGAGAGATCTGACGAGAAGGGTGAAGCTTCTCTCATCAAAGGAAAAGGCCACTGCTGAAAGTTAA 1443 0.4518 MAASKALMASLTHLRPLTCAASVSKSYPMRLVPQPPDLIKWVRKQGGFVHTAVKIAQDESKGLGLMASEEIPTGSDLIVLPHHLPLKFGSLESNNEDELDSVLVNLARHVPEELWAMKLGLKLLQERAKVGSFWWPYVSNLPETFSVPIFFPGQDIKNLQYAPLLHQVNKRCRFLLDFEQECWRALDNLKPDKHPFGGQEVDASALGWAMSAVSSRAFRLYGDKRPDGAHTEIPMMLPLIDMCNHSFNPNARIVQEKDNGTMKMLVKVVADTEIKQDDPLLLNYGFLSNDFFLLDYGFVVPSSPYDCVELKYDSAFLDAASMAAGVFSPSFSAPASWQEQVLCQLNLAGEAPDLKVTLGGREIVDGRLLAALRVLLTSDVEAVQNCDLNTLKSLTAEAPLGIANEVAALRTTIALCVIALGHFPTKIMDDESLLKQGASGSTELAIQFRIQKKSVIIDVMRDLTRRVKLLSSKEKATAES 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02103 480 CDD SET_LSMT 52 299 - -
Accr9g02103 480 SMART set_7 51 291 IPR001214 GO:0005515
Accr9g02103 480 Gene3D set domain protein methyltransferase, domain 1 6 298 - -
Accr9g02103 480 Gene3D - 334 477 IPR036464 -
Accr9g02103 480 Pfam SET domain 62 285 IPR001214 GO:0005515
Accr9g02103 480 ProSiteProfiles SET domain profile. 51 285 IPR001214 GO:0005515
Accr9g02103 480 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 36 445 - -
Accr9g02103 480 SUPERFAMILY SET domain 33 302 IPR046341 -
Accr9g02103 480 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 295 475 IPR036464 -
Accr9g02103 480 FunFam Histone-lysine N-methyltransferase setd3 3 298 - -
Accr9g02103 480 Pfam Rubisco LSMT substrate-binding 333 455 IPR015353 -
Accr9g02103 480 FunFam SET domain containing protein 321 474 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr9g02103 SET 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02103 - - qsa:O6P43_025913 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g02103 9 45657030 45660709 Accr9g02103 9 45657030 45660709 ECH