Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02096 ATGGTTGCTCTCGCCGCTCTCAGATCTTCAAAGTTCATCTCATGGAAACCGACTGGCAGGCTTCAGCAAACTTTAGCTAGCTGTGTAGAGCGGCGAGGTAATACTTTACACTCTGGAAAGGCTTCAGTAGTCAAGCTGTGTCCTGGATTTGCAGGAGAAGGGAGGTATTTCTATTTCCGGTCCAATTTGATACCAGCGTCGATTGATTATGCTCATGAATCGCCTCTCTGTACCACATTGTATAAAGATGGTTTTAGAGTACGAACTGTTGAGCACTTGCTTTCTGCTTTGGAGGGGACTGGTGTTGATAATTGCAGAATTGATATACAAAATTTGGATAGTGAAGGAGATTGTGCTGAGATCCCTATATTTGATGGGTCAGCTAGTGAATGGGTTGCAGCAGTGGAAGAAGTTGGTTTAAAGGTGGCAACTGATCACCATGGCGATAGTTGTGAAAAATTAGCTCCACATCTAAATGAACCAATGTTTGTGTTTAGGAATGATTCTTTCGTTGCTGCATTTCCTTCAACAATGATTCAAATGACTTATGGAATTAACTTTCCACAGGCAAGTTCTATTGGATGCCAGTGGTTTTCAACCCCTGTGGACAATTTGCTTTATTCCAAACAGATAGCTTTTTCAAGAACCTTCTGCATTTATGAAGAGATTGAACAAATGCGCAATGCTGGACTGATTAAAGGAGGTAGTCTAGAAAATGCCATTGTTTGCAGTGTCCATAAAGGTTGGTTGAATCCACCTTTGCGTTTCAATGATGAACCAAGCCGTCATAAGGTCCTAGATCTTATAGGAGATCTTTCCCTTTTTGCTCAGTTTGGGTATCAAGGAGTTCCAGTGGCACACTTTGTCGCTTACAAGGGTGGCCATGCATTGCATGCTGATCTGGTACGCCGCCTTATTGGGACCATTTGA 930 0.4258 MVALAALRSSKFISWKPTGRLQQTLASCVERRGNTLHSGKASVVKLCPGFAGEGRYFYFRSNLIPASIDYAHESPLCTTLYKDGFRVRTVEHLLSALEGTGVDNCRIDIQNLDSEGDCAEIPIFDGSASEWVAAVEEVGLKVATDHHGDSCEKLAPHLNEPMFVFRNDSFVAAFPSTMIQMTYGINFPQASSIGCQWFSTPVDNLLYSKQIAFSRTFCIYEEIEQMRNAGLIKGGSLENAIVCSVHKGWLNPPLRFNDEPSRHKVLDLIGDLSLFAQFGYQGVPVAHFVAYKGGHALHADLVRRLIGTI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02096 309 Gene3D lpxc deacetylase, domain 2 157 308 IPR011334 GO:0008759|GO:0009245
Accr9g02096 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Accr9g02096 309 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 3 307 IPR004463 GO:0008759|GO:0009245
Accr9g02096 309 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 306 IPR004463 GO:0008759|GO:0009245
Accr9g02096 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 160 306 IPR020568 -
Accr9g02096 309 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 306 IPR004463 GO:0008759|GO:0009245
Accr9g02096 309 Gene3D lpxc deacetylase, domain 1 20 147 IPR015870 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02096 9 305 Carbohydrate Esterase AT1G25054 62.081 3.94e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02096 K02535 - qsa:O6P43_025917 484.567