Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02073 ATGGTAAAATCGTCCGATAATGGTTTCGGTTCTGTGGCGCCTTTCCTGAAAAAATGTTATGAGATGGTAGACGATGAGTCCACCGATTCGCTCATATCCTGGAGCAAAAACAATGATAGTTTTATCATATGGGACATGACTGAGTTCTCCGTGAGTTTGCTTCCCAAGTATTTCAAGCACAACAATTTCTCCAGTTTCATCCGGCAGCTTAATATTTATGGTTTCAGGAAAACTGATACAGATCGCTGGGAATTTGCCAATGATGACTTCATCAGAGATCAAAAGCATTTACTAAAGAATATATTGAGAAGAAAACATCCACATGTTGCAGATCAGCGAAAGCCATTACAGCAGCAAGAGAATCACAATGTGCCTTCTCAAGAAGTTAAATGCTACGACCTATGGAAAGAAGTTGAGAATTTGAAAGATGATAAAAATGCACTCACACAGGAGTTGGTTAATCTTAGGCAGCACCAGGAATCATCTAAGGACAAGTTGCTGCTCCTGACCAATCGGCTCCAAGGAATGGAAAAGAATCAGCAACAGATGTTATCATTCTTGGTCATGGCCATGCAAATCCCCGGGTTCATGGTTCAGCTGCTTCAGCCTAAGGAAAACGGTTGGCGTACAACTGAGACAAGCAATATGTTGGAACACAGTGTAGAAGATGTTCAGCCAGTTGCTTCTGATGGGATGATAATGAAGTATCAACCACCCTTGAGTGAAAAATTGAAGCCTGTGGTTACACCGTCTCGTTTTTCAGATGAGCAACCGGAATCCAATCTCTGTACTGATGGGTTGAAAGATTATTTCATCAATTCTGACTTCTTGAAAGTACTCATGGATGAAAATTTGTGTCAAATAGATACTCATTCTCCATTTAATCTACCAAATTTACCCGATGATAATGCCTGGGAACAGCTTCTTTTAGGTAGTCCCTTCACTGAAAATGAAGATTCAAATAGGGAAAGTGACAAGCCCACCAACAATGGAATGGAGATCGAGCCTGCTATATGCGAAACACTGACTGATAAATTCCAAAATTGTGTTGGGTTGATGCCAGAAATGGACAAAACTCAGAAGAGTGGATTGGAAGTATCTGCTAGTGCTAATGGCGTTCATCTGGAGAAGCTGCAGAGTTTGGAATCCCTAACTGAGGAAATAGAATTTTTGGCTTCTGAAGCAAATGAGGACTAG 1197 0.4094 MVKSSDNGFGSVAPFLKKCYEMVDDESTDSLISWSKNNDSFIIWDMTEFSVSLLPKYFKHNNFSSFIRQLNIYGFRKTDTDRWEFANDDFIRDQKHLLKNILRRKHPHVADQRKPLQQQENHNVPSQEVKCYDLWKEVENLKDDKNALTQELVNLRQHQESSKDKLLLLTNRLQGMEKNQQQMLSFLVMAMQIPGFMVQLLQPKENGWRTTETSNMLEHSVEDVQPVASDGMIMKYQPPLSEKLKPVVTPSRFSDEQPESNLCTDGLKDYFINSDFLKVLMDENLCQIDTHSPFNLPNLPDDNAWEQLLLGSPFTENEDSNRESDKPTNNGMEIEPAICETLTDKFQNCVGLMPEMDKTQKSGLEVSASANGVHLEKLQSLESLTEEIEFLASEANED 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02073 398 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g02073 398 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g02073 398 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g02073 398 FunFam Heat shock transcription factor 1 9 105 - -
Accr9g02073 398 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g02073 398 Coils Coil 138 165 - -
Accr9g02073 398 SUPERFAMILY "Winged helix" DNA-binding domain 11 104 IPR036390 -
Accr9g02073 398 Coils Coil 381 398 - -
Accr9g02073 398 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 232 IPR027725 -
Accr9g02073 398 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr9g02073 398 Gene3D - 9 105 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02073 Accr-Chr9 45226480 45230179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02073 1 393 HSF AT1G67970 45.477 3.73e-94 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr9g02073 HSF_DNA-bind 6.7e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02073 K09419 - qsa:O6P43_025963 486.108