Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02054 ATGGAACAGGGTTTTCCGGGGATCCTCAAAATTCGTATTAAAAAAGGAATCAACCTGGCAGTACGTGACAGTCATACAAGTGATCCTTACGTTGTTATCACCATGCACGAACAGAAACTGAGGACTAAAGTTGTTGAAGATGACTGCAATCCTGAGTGGAACGATGAGCTGACATTGTATGTAAAGAGAATCAATGATCCAATCATTCTAACAGTGTTCGACAAGGACACGTTCACGGAGGACGATCCAATGGGGGAAGCAGAGTTAGACATAAAGCCATTGCTACAGTGTGCGAAGATGAACATGACAATGACACAAAATCTGAAAGAAGAATGTGTGGTCAATAGAGTAAAGCCCAGCAAGAATAACTGCCTCTCTGAAGAAAGCTTGTGCACCTGGGTTGACGGAAAATTCCGACAAGAACTGCTTCTCAAATTGAACAAACTCGTCGAAGTTGCGTGGAATGACGAAGGTTGTTTGTGA 483 0.4286 MEQGFPGILKIRIKKGINLAVRDSHTSDPYVVITMHEQKLRTKVVEDDCNPEWNDELTLYVKRINDPIILTVFDKDTFTEDDPMGEAELDIKPLLQCAKMNMTMTQNLKEECVVNRVKPSKNNCLSEESLCTWVDGKFRQELLLKLNKLVEVAWNDEGCL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02054 160 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 116 IPR035892 -
Accr9g02054 160 SMART C2_3c 8 103 IPR000008 -
Accr9g02054 160 Pfam C2 domain 7 100 IPR000008 -
Accr9g02054 160 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Accr9g02054 160 Gene3D C2 domain 6 148 IPR035892 -
Accr9g02054 160 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 7 149 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02054 Accr-Chr9 44625761 44638583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02054 39 146 C2H2 Transcription Factor Family AT1G70790 50.000 8.92e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02054 - - pcin:129322620 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g02054 9 44625761 44638583 Accr9g02054 9 44625761 44638583 ECH
Accr9g02054 9 44625761 44638583 Accr3g01564 3 18673357 18677257 ECH