Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02039 ATGATCAGATCCAAAAGTTTTCTTCAAAGTGTTATGAAGCATCTCAAATTCGGTTCAAGCAGAGACAGACAGAACGAAGACGACGTTCACAGGATTGCCGCCAAGGAGCAGAAGGTGTTTTCCTACGAAACGTTAGCTTCGGCGACGAGGAATTTCAATCTTCATCACAAGCTAGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTTGAAGATGGAAGAGAGATAGCAGTGAAGAAGCTATCAATCAGATCAAACCAAGGGAAGAAGGAGTTCATCAATGAGGCAAAATTGTTGGCGCGTGTGCAGCACCGCAATGTTGTGAATCTGTTGGGCTACTGTGTGTATGGTTCCGAGAAGCTTCTTGTGTACGAGTATGTTCCTCATGAGAGCCTTGACAAAATCCTCTTCAAATCGAATAGGAGAAAAGAACTTGACTGGCAAAAGAGGTTTGGAATAATAACAGGAATTGCTAGAGGGTTGCTTTATCTTCATGAAGATGCGCACGAGTGCATAATTCATAGAGACATAAAAGCCAGCAATGTTTTGCTTGACGATAAATGGAACCCTAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATGAAACCCACGTCAAAACTCGTGTGGCTGGAACCAATGGATACATGGCTCCAGAATATGTAATGTATGGGCATTTATCGACGAAAGCAGATGTATTTAGTTTTGGAGTCCTGATTTTGGAGATCATTAGTGGTCAACGAAACTTATCATTTAACTTGGATGTGGATGCACAGAACCTCATCGACTGGGCATACAAGCTTTACAAAAAAGGACGAAGCTTAGAAATCATGGACAGTGCAATAGCTGCTTCAGCAGTGCCTGCACAAGTAGCAATGTGCGTTCAACTAGGCCTGCTATGCATTCAAGGCGACCCAAGCCTCCGCCCCACCATGCACCGGGTGGTGTTGGTGTTGTCGAAAAAGCCAGGCCACTTAGAAGAACCGATGAGACCCGGTGTGCCGGGTTCATCAAGATACCGAAGATCTCATAATCCCTATACATTGTCTTCCACAGTTGATAGTAGTTCTACTGGATCTAGTTCACATACTGGTACTTCAAGCAATGTCTATGACAGTAGGTCAACCGCAACGGCCACCACGGCTGCCACAGCTGCAACAGCAAGCACCTCAGCTTCCAGAGAATTAGACCCGCGGGGAAAACGTGTAATTGATGAGGGTTAA 1233 0.455 MIRSKSFLQSVMKHLKFGSSRDRQNEDDVHRIAAKEQKVFSYETLASATRNFNLHHKLGEGGFGPVYKGKLEDGREIAVKKLSIRSNQGKKEFINEAKLLARVQHRNVVNLLGYCVYGSEKLLVYEYVPHESLDKILFKSNRRKELDWQKRFGIITGIARGLLYLHEDAHECIIHRDIKASNVLLDDKWNPKIADFGMARLFPEDETHVKTRVAGTNGYMAPEYVMYGHLSTKADVFSFGVLILEIISGQRNLSFNLDVDAQNLIDWAYKLYKKGRSLEIMDSAIAASAVPAQVAMCVQLGLLCIQGDPSLRPTMHRVVLVLSKKPGHLEEPMRPGVPGSSRYRRSHNPYTLSSTVDSSSTGSSSHTGTSSNVYDSRSTATATTAATAATASTSASRELDPRGKRVIDEG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02039 410 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 374 - -
Accr9g02039 410 MobiDBLite consensus disorder prediction 329 410 - -
Accr9g02039 410 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Accr9g02039 410 Gene3D Phosphorylase Kinase; domain 1 14 127 - -
Accr9g02039 410 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g02039 410 SUPERFAMILY Protein kinase-like (PK-like) 37 345 IPR011009 -
Accr9g02039 410 Pfam Protein tyrosine and serine/threonine kinase 53 319 IPR001245 GO:0004672|GO:0006468
Accr9g02039 410 MobiDBLite consensus disorder prediction 344 397 - -
Accr9g02039 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Accr9g02039 410 CDD STKc_IRAK 58 324 - -
Accr9g02039 410 Gene3D Transferase(Phosphotransferase) domain 1 128 331 - -
Accr9g02039 410 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Accr9g02039 410 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02039 Accr-Chr9 44344242 44347732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02039 40 342 Receptor kinase-like Gene Family AT4G11530 51.148 5.92e-109 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr9g02039 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02039 - - gmx:100795769 577.4