Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02006 ATGTCTGATTCATTCAGAGCCTTCAAGCTTTCCTCTTACACCCCAAATACCATCATTATTTCTCCATCATCTGCTCCACATATCACTTCAAACCCTTATTATTGTCTGTGTGCCGACTGTACGAATCATCTCTCGTTCAATATTCACCATCTTGGAGAGGAAGAAGGAGGTGTTACTACAAGCAACTCAAGGTGGACCCCAACACCAGCACAGTTGCTATACCTTGAGCAACTCTACACACAAGGAACCAAGACTCCTACGGCTCAACAAATCCAGCTGATCGCTTCACAGCTACGTCATTTTGGCAACATCCAAGCCAAGAATGTCTTCTACTGGTTTCAGAACCACAAAGCTAGAGACCGCCACTACCACAAACGTCGTAGTTCCGACCTGCAAATCACCTCTCCTCCTGCTTTTCATCAGCAACAACAAAAAGATCACTTCACTCAAACCCTAATGCTTCAATCACCTCACGACGCTTTTCAAGGATTGAGAGGGACAGGTTATGAAGTTAAAGAGTCAAATGTGTGGAACTGCAGTGCCCTTGCCCAGGTTTCTGATTCACTGAATAGAGCAGGAAGAGGAGCTTATAGGAGGACTCAAAGAGAGGAGAGAGAAACACAAATTTTGAGAATGAAGAGCGAGGAAAACCGAGAAGCTAAGTGCCAAATTAAAGATATGTGTTACTTCCTTTCAAATTCCAAGAATCTCATCAAAAGCATTGCGAATACTTCAACTACAACTCATCATACACAAACTTCAAACCCTGCAAATTCTTACTGTCATGAAGAAGATGAAGAAGTTGCAGATCACAGAACCCTTAAGCTGTTTCCTCTTAAGAGATCAGATGAAGATGATGATGATGAGTGCACTGAAAGCAGCAAACGTAAATTCTGTTCCTTCAATAATACTGCTTCCATGGACTCTGAAGAAATAACTTCCAATCAGTTTTTTGAGTTCCTTCCTTTAAGAAATTGA 978 0.4182 MSDSFRAFKLSSYTPNTIIISPSSAPHITSNPYYCLCADCTNHLSFNIHHLGEEEGGVTTSNSRWTPTPAQLLYLEQLYTQGTKTPTAQQIQLIASQLRHFGNIQAKNVFYWFQNHKARDRHYHKRRSSDLQITSPPAFHQQQQKDHFTQTLMLQSPHDAFQGLRGTGYEVKESNVWNCSALAQVSDSLNRAGRGAYRRTQREERETQILRMKSEENREAKCQIKDMCYFLSNSKNLIKSIANTSTTTHHTQTSNPANSYCHEEDEEVADHRTLKLFPLKRSDEDDDDECTESSKRKFCSFNNTASMDSEEITSNQFFEFLPLRN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02006 325 Gene3D - 59 122 - -
Accr9g02006 325 ProSiteProfiles 'Homeobox' domain profile. 58 123 IPR001356 GO:0003677
Accr9g02006 325 Pfam Homeodomain 62 122 IPR001356 GO:0003677
Accr9g02006 325 CDD homeodomain 64 122 IPR001356 GO:0003677
Accr9g02006 325 SUPERFAMILY Homeodomain-like 61 126 IPR009057 -
Accr9g02006 325 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 53 320 IPR044555 GO:0003700|GO:0099402
Accr9g02006 325 SMART HOX_1 60 127 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02006 Accr-Chr9 43494986 43498711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02006 63 181 Wox Gene Family AT3G18010 43.697 5.44e-24 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr9g02006 Homeodomain 3.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02006 - - pcin:129321246 314.694