Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g02000 ATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAAGAATCTCGAGGATTTGACCCAAGGCAATGATACAGTGATTCCTGTGTCTGACTATCAACAAAAGAGGCGTGTCGGATATAAAGCCATAAAGAGTGCTTCATCAGGGGTGGTAGTAGTTGATGGGACATATGCTCTACATGCGAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAGCCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCTATCTACAAGGTGAAATGCAGAAGTGAGTCCCCTGATGGACATTTTGGTTCTGCCTTTCAACAAGATGAGGCCCAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGACGAAGCAACAATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACACTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGCATCTACAACAGTCAGTAATGACAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGATGAGGGGAACAAATAGGAAAACAGTTGGAACCGAAGCATTAAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTAAGTACACCACCACTAGTGTCTAATAAACCTTTGTCTCGTAATCAAGAAGGAGCAATTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACATTGTAACTGGAATTGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTCAGACTGACAACAGTGTACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGATCTGGAAAGACTAGTTTGGCTCATAAAATGGCAAATATTATTGGCTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATATGATAACTTCAGCTCGCTTGATCTAGCTTTGCTATCAAAGAATATTGATGACATACGGAATGTTCGGAGAACAAAAGTTCCTATCTTTGACTTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGACAAGAGTAGAGTGGGATGTTTTATGTCTCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGTTGCACATTGAACCACATCTTGTCCATGCTCATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCCAGAGATTCTTTCGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATTTATATTTAAAGCTTCCTGGGATCCCCTCGAATGGACAGTTGACAGAGGGTGATTGTATTAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCGAAAGTGGATTTTGATATTGGCATTAGTACAGTTATAGGTCTTCTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAAGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCTGGTCCATACATTCAGATCAAGGGCGTTGATAAGGATGCTGTAGAAGCAGCTGGTTCAATGCTTAAATTGGATGACACATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGCGGCATCTACTCTCAGCAGGCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGCAGAGAGGCTTCTCCAATAGAAGGGATTATCGAGGAAATGCAGTTGAGGATTAGAAAGCTAGAACGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTTGTGGGTTATTCACTATACCAAAGGAAGCGTCAATGA 2583 0.4057 MENYRNGVDEGNDLDSIDFDALVKNLEDLTQGNDTVIPVSDYQQKRRVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHFGSAFQQDEAQTDNCIEMYLRPPSASDEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNDNVSVSFETIDALGETYMVMRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNKPLSRNQEGAIVAPKPIRVTPDIVTGIEDLSQPWTRSPRKSKMEPVIATWRFISSDSSQTDNSVLDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYPEILSILDPAKFCSSVQKFIDLYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVIGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVEAAGSMLKLDDTYTTKSYLQIILENLPALERTFGGIYSQQAARMQEIVEFIQSQGSSLASECSPSREASPIEGIIEEMQLRIRKLERWLTVNTVLWTFLMSALVGYSLYQRKRQ 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g02000 860 Gene3D - 614 772 - -
Accr9g02000 860 SUPERFAMILY CYTH-like phosphatases 633 767 IPR033469 -
Accr9g02000 860 Gene3D - 424 601 IPR027417 -
Accr9g02000 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 413 595 IPR027417 -
Accr9g02000 860 SMART AAA_5 424 568 IPR003593 GO:0016887
Accr9g02000 860 CDD UMPK_like 1 134 - -
Accr9g02000 860 Gene3D - 2 150 IPR027417 -
Accr9g02000 860 PANTHER URIDINE KINASE 1 182 - -
Accr9g02000 860 CDD UMPK_like 427 595 - -
Accr9g02000 860 PRINTS Uridine kinase signature 425 442 - -
Accr9g02000 860 PRINTS Uridine kinase signature 452 463 - -
Accr9g02000 860 PRINTS Uridine kinase signature 546 556 - -
Accr9g02000 860 Pfam Phosphoribulokinase / Uridine kinase family 15 131 IPR006083 GO:0005524|GO:0016301
Accr9g02000 860 Pfam Phosphoribulokinase / Uridine kinase family 427 592 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g02000 Accr-Chr9 43442619 43452354 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g02000 420 561 PRT Gene Family AT1G55810 25.974 1.19e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g02000 - - gmx:100778905 1469.14