Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01999 ATGGATGACCAAGTTGTTCAGCGCGTCTTCCATGAAGGAGGTCGCGATTATTATCAACAACAGCCTTCTACTTCATCGTCTTCCTCCTCCATCCTTCAATCTCTTCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAGTAAAATCTATCCAAGAACTTCGAGAGAAAAAAGAGGGTCTTGTTACAGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGCAATGGAGTTGATGAAGGGAATGATTTGGATTCTATAGACTTTGATGCCTTGGTCAAGAATCTCGAGGATTTGACCCAAGGCAATGATACAGTGATTCCTGTGTCTGACTATCAACAAAAGAGGCGTGTCGGATATAAAGCCATAAAGAGTGCTTCATCAGGGGTGGTAGTAGTTGATGGGACATATGCTCTACATGCGAAACTGCGGTCTTTGCTAGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCGCTGGATTACCTTATTGACAGTATTTTCCCATTGTTTCGGAAGCACATTGAGCCAGATCTTCATCATGCGCAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCTATCTACAAGGTGAAATGCAGAAGTGAGTCCCCTGATGGACATTTTGGTTCTGCCTTTCAACAAGATGAGGCCCAAACAGACAATTGTATAGAGATGTATCTTAGACCTCCTTCAGCTAGTGACGAAGCAACAATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTCATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACACTAGGGGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGCATCTACAACAGTCAGTAATGACAATGTTTCTGTGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGATGAGGGGAACAAATAGGAAAACAGTTGGAACCGAAGCATTAAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTAAGTACACCACCACTAGTGTCTAATAAACCTTTGTCTCGTAATCAAGAAGGAGCAATTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACATTGTAACTGGAATTGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCGTTTTATATCTTCAGATTCATCTCAGACTGACAACAGTGTACTAGATCCTTCATCTTTCAGGGATACTATGAGGCTTGCTCCAATGCCTGATTCCTATGACCTGGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGATCTGGAAAGACTAGTTTGGCTCATAAAATGGCAAATATTATTGGCTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACGAGTAAAGGATTTTAAATATGATAACTTCAGCTCGCTTGATCTAGCTTTGCTATCAAAGAATATTGATGACATACGGAATGTTCGGAGAACAAAAGTTCCTATCTTTGACTTGGAAAGTGGTGCCCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATCCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGACAAGAGTAGAGTGGGATGTTTTATGTCTCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGTTGCACATTGAACCACATCTTGTCCATGCTCATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCATTGTTTGTATTGAAGAGTAACAAAAAAGTAGCTTATCCAGAGATTCTTTCGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATTTATATTTAAAGCTTCCTGGGATCCCCTCGAATGGACAGTTGACAGAGGGTGATTGTATTAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCGAAAGTGGATTTTGATATTGGCATTAGTACAGTTATAGGTCTTCTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTCATTTACCAAGATGGAAAGATTCTGATTGAGGTTGACCATCTACAAGATGTCTCTGGTCCATACATTCAGATCAAGGGCGTTGATAAGGATGCTGTAGAAGCAGCTGGTTCAATGCTTAAATTGGATGACACATATACTACTAAAAGTTATCTTCAAATAATTTTGGAAAACCTACCTGCACTGGAAAGAACTTTTGGCGGCATCTACTCTCAGCAGGCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTTAGCATCAGAATGCTCACCAAGCAGAGAGGCTTCTCCAATAGAAGGGATTATCGAGGAAATGCAGTTGAGGATTAGAAAGCTAGAACGGTGGCTTACTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTTGTGGGTTATTCACTATACCAAAGGAAGCGTCAATGA 2859 0.4068 MDDQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRNGVDEGNDLDSIDFDALVKNLEDLTQGNDTVIPVSDYQQKRRVGYKAIKSASSGVVVVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHFGSAFQQDEAQTDNCIEMYLRPPSASDEATINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTVSNDNVSVSFETIDALGETYMVMRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNKPLSRNQEGAIVAPKPIRVTPDIVTGIEDLSQPWTRSPRKSKMEPVIATWRFISSDSSQTDNSVLDPSSFRDTMRLAPMPDSYDLDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKRVKDFKYDNFSSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQLHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYPEILSILDPAKFCSSVQKFIDLYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVIGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVSGPYIQIKGVDKDAVEAAGSMLKLDDTYTTKSYLQIILENLPALERTFGGIYSQQAARMQEIVEFIQSQGSSLASECSPSREASPIEGIIEEMQLRIRKLERWLTVNTVLWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01999 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Accr9g01999 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Accr9g01999 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
Accr9g01999 952 Gene3D - 63 242 IPR027417 -
Accr9g01999 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Accr9g01999 952 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Accr9g01999 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Accr9g01999 952 Gene3D - 516 693 IPR027417 -
Accr9g01999 952 CDD UMPK_like 64 226 - -
Accr9g01999 952 Gene3D - 706 864 - -
Accr9g01999 952 PANTHER URIDINE KINASE 11 274 - -
Accr9g01999 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
Accr9g01999 952 CDD UMPK_like 519 687 - -
Accr9g01999 952 PRINTS Uridine kinase signature 517 534 - -
Accr9g01999 952 PRINTS Uridine kinase signature 544 555 - -
Accr9g01999 952 PRINTS Uridine kinase signature 638 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01999 Accr-Chr9 43441388 43452354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01999 512 653 PRT Gene Family AT1G55810 25.974 1.11e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01999 - - gmx:100778905 1623.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr9g01999 9 43441388 43452354 Accr9g01999 9 43441388 43452354 ECH