Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01990 ATGCAAGGGCATTCCATTGTCCGCTTGTCAAAAATGGAGTCAACTGTAATATACAGCTCTTTCACAGTCCTCTTCTTCCTCCTCCTCCTCCTCACTACTGTCTCTGCTTCTTCTTCCTCACATCCAACCCCCTCCTTCCCAAAACAAGCCTTACCCACAAAATCTGGCTACCTCTCTGTTAACCACGCTTCCAAATCCGCCATTTTCTACACTTTCTACGAAGCCCAAAACCCCACTTCACCTCTCTCTCAAACTCCACTCCTCATCTGGCTCCAAGGCGGCCCTGGCTGTTCATCCATGATCGGCAACTTCTTCGAGCTCGGTCCATGGCGCGTCACCAAATCCCTCAATCTCGCCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCCTCCTTTTCCTCGATAGCCCAATCGGAACCGGATTCAGTGTCGCCTCAAACCCTAGTGAAATCCCCAGAAACCAGAAATCTGTAGCCAAACACCTCTTCGCTGCTATCACCGAGTTCATTCGACTTGACCCGGATTTCAAGTTTCGCCCAATTTATATAACCGGCGAAAGCTACGCTGGCAAGTATGTTCCTGCAATTGGGTATTACATATTACACAGAAATTCTCGATTTAATCTGGCTGGTGTGGCTATTGGCGACGGGTTAACACACCCTGTAGTACAAGTTGCCACTCACGCTTTGAATGCTTACTATGTAGGTTTGATCAATGAGAAGCAAAAGAATGAGTTGGAGGAGGTTCAATCTGAAGCAATCAGATTGACCAAATTGGGGAATTGGAGTGAAGCAGTAGAAGCCAGAACCAATGCTTTGGGTCTGTTGAGGAACATGACTGGTTTGGCTACTTTGTATCATTACACAAGAAAATCTCCATATGAAGATGATTTGGTTACTGAGTTCTTGAAATCCAAAGAGGTGAAGAAGGCATTAGGTGCTAATGAATCTATTGTGTTTGAGGCATGTAGTGATACTGTAGGAGAGGCAATGAAGGAAGATAAGATGAAGAGTGTGAAGCACATGGTGGAATACTTGGTGAAAAAAACCAGAGTTCTTCTGTACCAAGGTCAGTTTGATCTGCAAGATGGTGTGGTTCAGGTAGAAGCATGGGTGAGGACAATGAAATGGGATGGGATTGAGAAGTATCTAAATGCAGATAGGAAGATTTGGAAAGTGAATGGTGAGATTGCTGGGTATGTTCAAAAATGGGAGAGCCTCACTAATGTTGTTGTTTTAGGAGCCGGCCATCTTTTGCCTAGTGATCAATCTGTGAATTCTCAGGCCATGATTGAGAACTGGGTTTTGCAGAAGGATTTGTTTGGGAACGGTGATTATCAACAGAAGGATGTGTTACAGAGATTTATTTAG 1371 0.4493 MQGHSIVRLSKMESTVIYSSFTVLFFLLLLLTTVSASSSSHPTPSFPKQALPTKSGYLSVNHASKSAIFYTFYEAQNPTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLAPNPGSWNRIFGLLFLDSPIGTGFSVASNPSEIPRNQKSVAKHLFAAITEFIRLDPDFKFRPIYITGESYAGKYVPAIGYYILHRNSRFNLAGVAIGDGLTHPVVQVATHALNAYYVGLINEKQKNELEEVQSEAIRLTKLGNWSEAVEARTNALGLLRNMTGLATLYHYTRKSPYEDDLVTEFLKSKEVKKALGANESIVFEACSDTVGEAMKEDKMKSVKHMVEYLVKKTRVLLYQGQFDLQDGVVQVEAWVRTMKWDGIEKYLNADRKIWKVNGEIAGYVQKWESLTNVVVLGAGHLLPSDQSVNSQAMIENWVLQKDLFGNGDYQQKDVLQRFI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01990 456 SUPERFAMILY alpha/beta-Hydrolases 51 438 IPR029058 -
Accr9g01990 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 407 420 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 FunFam Carboxypeptidase 37 442 - -
Accr9g01990 456 Gene3D alpha/beta hydrolase 34 448 IPR029058 -
Accr9g01990 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 423 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 Pfam Serine carboxypeptidase 50 436 IPR001563 GO:0004185|GO:0006508
Accr9g01990 456 Coils Coil 239 259 - -
Accr9g01990 456 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01990 Accr-Chr9 43366728 43368098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01990 296 440 Calmodulin-binding Proteins AT2G22960 22.973 6.32e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01990 K09645 - qsa:O6P43_025832 621.698