Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01989 ATGGATTCAACAGCAAAATCCAACTCTCTCACACTCCTCATCATCATCTTCATCTTCAATGTCTCTGCTTCTTCTTCAAATCTAACACCTTCCTTCCCAGAACAAGCCTTGCCCACAAAATCTGGCTACCTCTCTGTTAACCCTACCTCAAAATCCGCCATTTTCTACGCTTTCTATGAAGCCCAGAACCTCACTTCACCTCTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGCGGCCCCGGCTGCTCCTCCATGATCGGCAACTTCTTCGAGCTCGGACCATGGCGCGTCACCAAATCCTTGAATCTAATCCCCAATCCTGGTTCTTGGAACCGAATTTTCGGCCTTCTTTTCCTCGATAACCCAATCGGAACCGGATTCAGCATCGCCTCAAATCCTGAGGAAATCCCCAGAGACCAAAATTCAGTGGCCAAACACCTCTACACTGCCATAACCAAGTTCATTCAGCTAAACCCTGCTTTCAAGGATCGCCAAATTTATATAACCGGCGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTATTACATATTACAAATGAATTCACGTTTGAATGCTTCACAGAGGGTGAATTTAGCAGGCGTGGCGATCGGAGATGGGTTAACTCACCCATTGGTACAAGTTAATACTCATGCTGCGAATGCTTATTTCCTAGGGTTGATCAACGAGAGGCAGAAGAATGACATGGAGAAGACTCAATTTGACGCCGTCAGATTGACCAAACAGGGGAATTGGAGTGCAGCAAGAGAAGCAAGAAACCGAATTTTCAGATTGTTGCATAACATGACAGGGTTGGCTACTTCGTTCGACTTCACAAGGAAAGCACCATATAAGACTCGCTTGGTCACTGAGTTCTTGAAATCCAGAGAGGTGAAGAAGGCACTAAGTGTGAGTGAAAGTCTAGTTTTTGAAGGATGTAGTGATATTGTAAAAGCTGCATTGCAGGAGGATGTGATGAAGAGTGTGAGGTACATGGTGGAATACTTGGTGACAAAAACCAGAGTGCTCCTATACCAAGGCCAGCATGATCTAAGAGATGGTCCAGTTCAAGTAGAAGCATGGGTGAAGACAATGAAATGGGAAGGGATTGAGAAATATTTGAATGCAGATAGGAAGATATGGAAAGTGAATGGTGAACTTGCTGGGTATGTGCAGAAATGGCAGAGCCTCACTAATGTTGTGGTTTTGGGAGCTGGGCATTATTTGCCAGCTGATCAAGCCGTGAACTCTCAAGTCATGATTGAAAACTGGGTTTTGCAGAAGGGTTTTTGA 1299 0.4511 MDSTAKSNSLTLLIIIFIFNVSASSSNLTPSFPEQALPTKSGYLSVNPTSKSAIFYAFYEAQNLTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLIPNPGSWNRIFGLLFLDNPIGTGFSIASNPEEIPRDQNSVAKHLYTAITKFIQLNPAFKDRQIYITGESYAGKYVPAIGYYILQMNSRLNASQRVNLAGVAIGDGLTHPLVQVNTHAANAYFLGLINERQKNDMEKTQFDAVRLTKQGNWSAAREARNRIFRLLHNMTGLATSFDFTRKAPYKTRLVTEFLKSREVKKALSVSESLVFEGCSDIVKAALQEDVMKSVRYMVEYLVTKTRVLLYQGQHDLRDGPVQVEAWVKTMKWEGIEKYLNADRKIWKVNGELAGYVQKWQSLTNVVVLGAGHYLPADQAVNSQVMIENWVLQKGF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01989 432 FunFam Carboxypeptidase 23 432 - -
Accr9g01989 432 Pfam Serine carboxypeptidase 36 428 IPR001563 GO:0004185|GO:0006508
Accr9g01989 432 Gene3D alpha/beta hydrolase 20 431 IPR029058 -
Accr9g01989 432 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Accr9g01989 432 SUPERFAMILY alpha/beta-Hydrolases 37 429 IPR029058 -
Accr9g01989 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Accr9g01989 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Accr9g01989 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Accr9g01989 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Accr9g01989 432 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 415 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01989 Accr-Chr9 43360244 43361542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01989 300 427 Calmodulin-binding Proteins AT2G22960 24.242 2.94e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01989 K09645 - qsa:O6P43_032607 636.721