Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01988 ATGGAGTCAACTGTAATATCCAGCTCTTTCGCGGTCCTCTTCCTCCTCCTCCTCAATGTCTCTGCTTCTTCTTCTTCGAATCCAACCCCGTCCTTCCCAAAAGAAGCCTTACCCACAAAATCTGGCTACCTCTCTGTAAACCACACTTCCAAATCCGCCATTTTCTACACTTTCTACGAAGCCCAAAACCCCACTTCACCTCTCTCCCAAACCCCACTCCTCATCTGGCTCCAAGGCGGCCCTGGCTGTTCCTCCATGATCGGCAACTTCTTCGAGCTCGGTCCGTGGCTCGTCACCGAATCCCTCAATCTCGCCCCCAATCCTGGCTCTTGGAACAGAATCTTCGGCCTCCTTTTCCTCGATAGCCCAATCGGAACCGGATTCAGTGTCGCCTCAAACCCTAGTGAAATCCCCAGAAACCAGAAATCTGTCGCCAAACACCTCTTCGCTGCTATCACCGAGTTCATTCGACTTGACCCGGATTTCAAGTTTCGCCCAATTTATATAACCGGCGAAAGCTACGCTGGCAAGTATGTTCCTGCAATTGGGTATTACATATTACACAGAAATTCTCGATTTAATCTGGCTGGTGTGGCTATTGGCGACGGGTTAACACACCCTGTAGTACAAGTTGCCACTCACGCTTTGAATGCTTACTATGTAGGTTTGATCAATGAGAAGCAAAAGAATGAGTTGGAGAAGGTTCAATCTGAAGCAATCAGATTGACCAAATTGGGGAATTGGAGTGAAGCAGTAGAAGCCAGAACCAATGCTTTGGATCTGTTGAGGAACATGACAGGTTTGGCTACTTTGTATCATTACACAAGAAAATCTCCATATGAAGATGATTTGGTTACTGAGTTCTTGAAATCCAAAGAGGTGAAGAAGGCATTAGGTGCTAATGAATCTATTGTGTTTGAGGCATGTAGTGATACTGTAGGAGAGGCAATGAAGGAAGATGTGATGAAGAGTGTGAAGCACATGGTGGAATACTTGGTGAAAAAAACCAGAGTTCTTCTGTACCAAGGTCAATTTGATCTGCAAGATGGTGTGGTTCAGGTAGAAGCATGGGTGAAGACAATGAAATGGGATGGGATTGAGAAGTATCTAAATGCAGATAGGAAGATTTGGAAAGTGAATGGTGAGATTGCTGGGTATGTTCAAAAATGGGAGAGCCTCACTAATGTTGTTGTTTTAGGAGCCGGCCATCTTTTGCCTAGTGATCAATCTGTGAATTCTCAGGCCATGATTGAGAACTGGGTTTTGCAGAAGGATTTGTTTGGGAACGATGATTATCAATAG 1302 0.4524 MESTVISSSFAVLFLLLLNVSASSSSNPTPSFPKEALPTKSGYLSVNHTSKSAIFYTFYEAQNPTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWLVTESLNLAPNPGSWNRIFGLLFLDSPIGTGFSVASNPSEIPRNQKSVAKHLFAAITEFIRLDPDFKFRPIYITGESYAGKYVPAIGYYILHRNSRFNLAGVAIGDGLTHPVVQVATHALNAYYVGLINEKQKNELEKVQSEAIRLTKLGNWSEAVEARTNALDLLRNMTGLATLYHYTRKSPYEDDLVTEFLKSKEVKKALGANESIVFEACSDTVGEAMKEDVMKSVKHMVEYLVKKTRVLLYQGQFDLQDGVVQVEAWVKTMKWDGIEKYLNADRKIWKVNGEIAGYVQKWESLTNVVVLGAGHLLPSDQSVNSQAMIENWVLQKDLFGNDDYQ 433
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01988 433 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Accr9g01988 433 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 409 IPR001563 GO:0004185|GO:0006508
Accr9g01988 433 FunFam Carboxypeptidase 23 428 - -
Accr9g01988 433 SUPERFAMILY alpha/beta-Hydrolases 38 424 IPR029058 -
Accr9g01988 433 Pfam Serine carboxypeptidase 36 422 IPR001563 GO:0004185|GO:0006508
Accr9g01988 433 Coils Coil 225 245 - -
Accr9g01988 433 Gene3D alpha/beta hydrolase 21 431 IPR029058 -
Accr9g01988 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Accr9g01988 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Accr9g01988 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 393 406 IPR001563 GO:0004185|GO:0006508
Accr9g01988 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr9g01988 Accr-Chr9 43352482 43353783 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01988 282 426 Calmodulin-binding Proteins AT2G22960 22.297 3.06e-07 48.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01988 K09645 - qsa:O6P43_032607 627.476