Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01987 ATGGATTCAACAGCAAAATCCAACTCTCTCACACTCCTCATCATCATCTTCATCTTCAATGTCTCTGCTTCTTCTTCAAATCTAACACCTTCCTTCCCAAAACAAGCCTTGCCCACAAAATCTGGCTACCTCTCTGTTAACGCCACCTCAAATTCCGCCATTTTCTATGCTTTCTATGAAGCCCAGAGCCTCACTTCACCTCTCTCCCAAACCCCACTTCTCATATGGCTCCAAGGCGGCCCTGGCTGCTCCTCCATGATCGGCAACTTCTTCGAGCTCGGACCATGGCGCGTCACCAAATCCTTGAATCTAATCCCCAATCCTGGTTCTTGGAACAGAATTTTTGGCCTTCTTTTCCTCGATAATCCAATTGGAACCGGATTCAGTATCGCCTCAAATACTGATGAAATCCCCAGAGACCAAAATTCAGTGGCCCAACACCTCTACACTGCCATAACCACGTTCATTCAGCTAGACCCTGCCTTCAAGGATCGCCAAATTTATATAAACGGCGAAAGCTATGCTGGGAAGTATGTTCCTGCAATTGGGTACCACATACTACGAATGAACTCACGTTTGAATGCTTCACAGAGGGTGAATTTAGCAGGCGTGGCGATCGGAGATGGGTTAACTCACCCATTGGTACAAGTTACTACTCATGCTGCGCATGCTTATTTCCTAGGATTGATCAACGAGAGGCAGAAAAATGATTTGGAGAAGATTCAATTTGAAGCCGTCAGATTGATCAAACAGGGGAATTGGAGTGCAGCAAGAGAAGCAAGAAGCAGTATTTTCAGATTGTTGCATAACATGACAGGGTTGGCTACTTCCTTCGACTTCACAAAAAAAGCACCATATAAGACTCATTTGGTCACTGAGTTCTTGAAATCCAGAGAGGTGAAGAAGGCACTTGGGGTGAGTGGAAGTTTTGTTTTTAAAATTTGTAGTGGTACCGTAAAGGAGGCATTGCGGGAGGATGTGATGAAGAGTGTGAAGTACATGGTAGAGTACTTGGTGACAAAAACCAGAGTGCTTCTATACCAAGGCCAGCATGATCTAAGTGATGGTCCGGTTCAAGTAGAAGCATGGGTGAAGACAATGAAATGGGAAGGGATTGAGAAGTATTTGAATGCAGATAGGAAGATATGGAAAGTGAATGGTGAGCTTGCTGGGTATGTGCAAAAATGGCAGAGCCTCGCTAATGTTGTGGTTCTGGGAGCTGGCCATTATTTGCCACATGATCAAGCCGGGAACTCTCAAGCCATGATTGAAGACTGGGTTTTGCAGAAGGGTTTGTTTGAGAATGTTAATTTCACACCGTGCTCTGTTCTGTAG 1335 0.4502 MDSTAKSNSLTLLIIIFIFNVSASSSNLTPSFPKQALPTKSGYLSVNATSNSAIFYAFYEAQSLTSPLSQTPLLIWLQGGPGCSSMIGNFFELGPWRVTKSLNLIPNPGSWNRIFGLLFLDNPIGTGFSIASNTDEIPRDQNSVAQHLYTAITTFIQLDPAFKDRQIYINGESYAGKYVPAIGYHILRMNSRLNASQRVNLAGVAIGDGLTHPLVQVTTHAAHAYFLGLINERQKNDLEKIQFEAVRLIKQGNWSAAREARSSIFRLLHNMTGLATSFDFTKKAPYKTHLVTEFLKSREVKKALGVSGSFVFKICSGTVKEALREDVMKSVKYMVEYLVTKTRVLLYQGQHDLSDGPVQVEAWVKTMKWEGIEKYLNADRKIWKVNGELAGYVQKWQSLANVVVLGAGHYLPHDQAGNSQAMIEDWVLQKGLFENVNFTPCSVL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01987 444 Gene3D alpha/beta hydrolase 20 437 IPR029058 -
Accr9g01987 444 ProSitePatterns Serine carboxypeptidases, serine active site. 169 176 IPR018202 GO:0004185
Accr9g01987 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 107 119 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 180 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 130 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 415 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 FunFam Carboxypeptidase 23 434 - -
Accr9g01987 444 Pfam Serine carboxypeptidase 36 427 IPR001563 GO:0004185|GO:0006508
Accr9g01987 444 SUPERFAMILY alpha/beta-Hydrolases 37 429 IPR029058 -
Accr9g01987 444 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01987 Accr-Chr9 43335193 43336527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01987 297 427 Calmodulin-binding Proteins AT2G22960 20.611 7.98e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01987 K09645 - qsa:O6P43_032607 621.698