Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01973 ATGAGGAAGCCTTGCTGTGATAAGCAAGACATGAACAAAGGAGCTTGGTCTAAACAAGAAGACCAAAAGCTTATTGATTATATCAACAAACATGGCGAAGGTTGCTGGCGTACTCTTCCTCAAGCTGCAGGATTACTTCGCTGCGGGAAAAGTTGCAGGCTGAGATGGATAAATTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAACTTCATGCTCTGCTTGGCAATAGGTGGTCTCTGATAGCTGGAAGATTACCAGGAAGGACAGACAATGAAGTAAAAAATTATTGGAACTCTCATCTAAGAAGAAAGCTCATCAACATGGGAATAGATCCAAATAATCACAGACTGACTCCCAAATTCCCTATTCTTTCTCATCATCATCAATATCAAACAACTTCTGGTAGCTCAGCTTCATCAGGATTGAAGAAGAAGAAACACAAAGACAATCTCAACAACAACAACAATATTGAGCCAATAACAAAGAAGCCTAAAACTACTACTGGGAGTGCTGGTAATTATGAACAAGTTTCAGATGCTGCAAGTGGCTTAGAAGATGAGTCCTCTGGCTTATTGCCTGATCTAAACCTTGATCTCACAATTAACATTCCTTCTTCAACCATATTACCCACTAGTTCTGCTTATGATCATGAAGACAATAATCAAAAGCCAATGATTCATCAACATGAATCAAAGTCACCAAGGACTATGCAATTAGCTTCCTCTCCAACCCTTCTTCTGTTTCAGTGA 780 0.3949 MRKPCCDKQDMNKGAWSKQEDQKLIDYINKHGEGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLRRKLINMGIDPNNHRLTPKFPILSHHHQYQTTSGSSASSGLKKKKHKDNLNNNNNIEPITKKPKTTTGSAGNYEQVSDAASGLEDESSGLLPDLNLDLTINIPSSTILPTSSAYDHEDNNQKPMIHQHESKSPRTMQLASSPTLLLFQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01973 259 Gene3D - 68 115 - -
Accr9g01973 259 MobiDBLite consensus disorder prediction 241 259 - -
Accr9g01973 259 FunFam MYB transcription factor 67 128 - -
Accr9g01973 259 MobiDBLite consensus disorder prediction 236 259 - -
Accr9g01973 259 MobiDBLite consensus disorder prediction 163 183 - -
Accr9g01973 259 CDD SANT 68 111 IPR001005 -
Accr9g01973 259 CDD SANT 15 60 IPR001005 -
Accr9g01973 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 213 - -
Accr9g01973 259 SMART sant 65 113 IPR001005 -
Accr9g01973 259 SMART sant 12 62 IPR001005 -
Accr9g01973 259 FunFam MYB-related transcription factor 12 65 - -
Accr9g01973 259 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Accr9g01973 259 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Accr9g01973 259 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Accr9g01973 259 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Accr9g01973 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Accr9g01973 259 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Accr9g01973 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Accr9g01973 259 Gene3D - 13 65 - -
Accr9g01973 259 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01973 Accr-Chr9 43056502 43058241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01973 2 214 MYB Transcription Factor Family AT4G38620 56.109 1.91e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr9g01973 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01973 K09422 - rcu:8258211 314.694