Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01968 ATGCTCCTTCACTTATTTGTTTTCTTTATTCTCATATTTCAATGCTGGAAACCTGTTTCATCACTGAGCAACGAAACTGATCGTTTGTCTCTAATCAAATTCAAGGAATCAATATACAAGGATCCATATCGGATCATGGATTCTTGGAATTCATCCACACACTTCTGCGATTGGCATGGAATCTCTTGCAGCCACAAGCATCACAGAGTTACACATTTGATCTTGAAACGATATCAGTTATCAGGTACTATATCTCCTTTTATTGGCAATCTTTCCTTCCTAAGGATTATCGATCTACAAAACAATAATTTCCACGGAGAAATTCCAAAAGACCTGGGTCGTTTGTTCAGATTAGAAATACTTCATCTTGACAATAATACATTGACGGGAGAATTTCCAATCAATGTCACAAGTTGCTCTAACCTCGAGTACTTAGCATTTGGAGGGAATCATCTCATTGGCAAAATACCAATGGAGATTGGCTCTCTCCATAAGCTTGAAGTTTTGTATCTGCTTCAAAACAATTTCACTGGACAAATCCCAACTTCCTTGTGGAATATTACTTCTCTCATTTTTCTTTCTTTGGACGCTAATAACTTGGAAGGGACTATACCTATAGAAATAGGCCAGTTGAAAAATATGACAGATTTTGAGGTAGGTGGCAACAAGCTTTCAGGGACAATTCCTTTTGCTCTTTACAATTTGTCATCTCTCGCTTACATCATACTTGTTGGAAACCATTTCAATGGCCGTCTCCCTGCCAATATGTTCTCCAACCTCCCTAACCTCCAACTCTTGGCACTTGGAGGAAATCAATTCTCAGGTCGCATCCCAACATCCATTGTAAATGCGACTATGCTTGTAGGAATCTCTATAGGAGGAAATAATTTTGCAGGGCAAATTCCAAATCTTGGAAAGATGCATGACCTCTCAATACTAGAGTTAAGTGATAATAGTTTGGGAAGTAATTCTTCAAAAGACTGGGAGTTTCTAAATTCTTTGAGTAACTGCAGTAAGTTAGAAAGGCTATATTTGCTGCAAAATAATTTTGGGGGCCATTTACCAAAAACCATAGGTAATTTGTCAACCAAGATCACACATCTCGACCTTTCACAAAATCAAATATGTGGTAGAATTCCTATGGAATTAGGAAACCTCATTAACCTGATGTTGCTAGACATACAAATGAATTATTTCTCTGACATGATCCCAAATACTTTCGGGAAGTTTCATAACCTGCAATACTTGTCTTTGATGGGAAATAAACTTTCTGGAGAAATAATTCATTTCATAGGTAATCTCACTCAGTTATTTCACCTAGATTTGTCATATAATATGCTAGAAGAAAAAGTTCCTGCAAGTATTGGGAATTGTGAAAGTTTACAATATCTTGATCTGTCACAAAACAATTTTAGGGGAGCGATACCAATCCAGCTGTTCACTCTTTCAACTCTATCAATATTATTGAACTTGTCACATAACACTTTTGGTGGTGATGTCCCTAATGAGTTTGGAAACTTGAAAAATATAGGAAAATTGGATGTCTCTCATAATCAATTCTCTGGACAAATTCCCCAAACCATTGGGGATTGCCAAAGCTTAGAATCCCTCTTTTTGCAAGGGAATTTCTTTCAAGAAACCATCCCCATATCTTTGGCTTCATTGAAGGGTCTAAGATATTTAGACTTGTCACAAAATAATTTGTCAGGAACGATTCCAAAAGGCCTACAAGATGTTGCTTCTTTGGAGTACCTAAATGTTTCCTTCAACATGCTTGAAGGAGAGGTACCAAGCAAAGGTGTCTTTCAAAATGAAAGTGCAATTTCACTTGTGGGAAATAACAAGCTTTGTGGAGGCATATCAAAGTTAGAGCTGCCGCCATGCCCTACCAAATCCAATGGACAAAGAAAACATCAAAACTTGAAGCTGGTTGTATCAATATGTTGTGTGATTGCTTTTATTCTTCTGGTTGTTGTTGGTATTTATTATGGGAGGAAAATAAGCAAGAAATCTTCTTCAAGTTCACCAACAATTGACATGATTTACAAAGTATCATATCAAAGCTTGCACAACGCCACAAATGGATTCTCAGTTGATAAGTTGATTGGATCAGGGAGTTTTGGCTCTGTTTATAAGGGAAGCCTTGAATCTCAAGAAGTTGTTGCGATAAAGGTCATCAACCTTCAAATAAGGGGTGCTCACAAGAGTTTTGTTGCTGAATGTAATGCATTGAGAAATGCAAAGCATCGAAATCTGGTACAGATTATAACATGTTGCTCTAGCATAGATTACAAGGGCAATGAGTTTAAGGCTCTAGTTTATGAGTATATGGTTAATGGAAACTTGGAAAATTGGTTGCATCCTACAACAGAAAATCCAAATCATCAAAGACTTTTGCTCCTCGATCAAATAATAAATATTCTTATGGATATTGTGTCTGCGTTAAACTATCTTCACTATGAATATGGGCAACCTCTAATTCATTGTGATTTGAAGCCAAGCAATGTCCTTCTTGATGACAACATGGTTGCTCATTTAAGTGATTTTGGATTGGCAAGCCTACTCTCAATTGTTTCCGTTGTCTCTAATGAAACAAGTAGCACACTTGGTATAAAAGGCACTATTGGCTATATTCCTCCAGAATATGGAATGGGATCTGAGGTATCAATGCAAGGTGATATGTATAGCTTTGGCATTCTTACCTTAGAGATGTTAACTAAAAAAAGACCAACTGAAGATATATTTAATGGTGGCCACAATCTTCAAACATATGTGAAAGTTGCATTTCCAGACAAGCTTTTGGAAGTTGTGAGCCCAACCATTCTTCCACAAGAATTGGAACATATAGTGGGAGTATCAGGAGACATATCAGAGAACATGATGCAAATCCATCCAAATGTCGAGAAATGCTTGCATTCTTTATTTAAGATTGGACTTACATGTTCAATGGAATCACCTCATGAAAGAATGAGCGCAGGCGATGTCATCAAGGAGCTAAATTCTATTAAAAGTTTTTTCCCTTTTTGA 3027 0.369 MLLHLFVFFILIFQCWKPVSSLSNETDRLSLIKFKESIYKDPYRIMDSWNSSTHFCDWHGISCSHKHHRVTHLILKRYQLSGTISPFIGNLSFLRIIDLQNNNFHGEIPKDLGRLFRLEILHLDNNTLTGEFPINVTSCSNLEYLAFGGNHLIGKIPMEIGSLHKLEVLYLLQNNFTGQIPTSLWNITSLIFLSLDANNLEGTIPIEIGQLKNMTDFEVGGNKLSGTIPFALYNLSSLAYIILVGNHFNGRLPANMFSNLPNLQLLALGGNQFSGRIPTSIVNATMLVGISIGGNNFAGQIPNLGKMHDLSILELSDNSLGSNSSKDWEFLNSLSNCSKLERLYLLQNNFGGHLPKTIGNLSTKITHLDLSQNQICGRIPMELGNLINLMLLDIQMNYFSDMIPNTFGKFHNLQYLSLMGNKLSGEIIHFIGNLTQLFHLDLSYNMLEEKVPASIGNCESLQYLDLSQNNFRGAIPIQLFTLSTLSILLNLSHNTFGGDVPNEFGNLKNIGKLDVSHNQFSGQIPQTIGDCQSLESLFLQGNFFQETIPISLASLKGLRYLDLSQNNLSGTIPKGLQDVASLEYLNVSFNMLEGEVPSKGVFQNESAISLVGNNKLCGGISKLELPPCPTKSNGQRKHQNLKLVVSICCVIAFILLVVVGIYYGRKISKKSSSSSPTIDMIYKVSYQSLHNATNGFSVDKLIGSGSFGSVYKGSLESQEVVAIKVINLQIRGAHKSFVAECNALRNAKHRNLVQIITCCSSIDYKGNEFKALVYEYMVNGNLENWLHPTTENPNHQRLLLLDQIINILMDIVSALNYLHYEYGQPLIHCDLKPSNVLLDDNMVAHLSDFGLASLLSIVSVVSNETSSTLGIKGTIGYIPPEYGMGSEVSMQGDMYSFGILTLEMLTKKRPTEDIFNGGHNLQTYVKVAFPDKLLEVVSPTILPQELEHIVGVSGDISENMMQIHPNVEKCLHSLFKIGLTCSMESPHERMSAGDVIKELNSIKSFFPF 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01968 1008 Gene3D Transferase(Phosphotransferase) domain 1 777 1005 - -
Accr9g01968 1008 PANTHER OS04G0122200 PROTEIN 209 1003 - -
Accr9g01968 1008 ProSitePatterns Protein kinases ATP-binding region signature. 702 724 IPR017441 GO:0005524
Accr9g01968 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 777 1007 - -
Accr9g01968 1008 FunFam LRR receptor-like serine/threonine-protein kinase EFR 667 776 - -
Accr9g01968 1008 Gene3D Ribonuclease Inhibitor 327 637 IPR032675 -
Accr9g01968 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 183 - -
Accr9g01968 1008 Gene3D Ribonuclease Inhibitor 23 183 IPR032675 -
Accr9g01968 1008 SUPERFAMILY Protein kinase-like (PK-like) 671 999 IPR011009 -
Accr9g01968 1008 SUPERFAMILY L domain-like 363 618 - -
Accr9g01968 1008 Pfam Protein kinase domain 697 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01968 1008 SMART LRR_sd22_2 211 237 - -
Accr9g01968 1008 SMART LRR_sd22_2 434 466 - -
Accr9g01968 1008 SMART LRR_sd22_2 362 385 - -
Accr9g01968 1008 SMART LRR_sd22_2 410 430 - -
Accr9g01968 1008 SMART LRR_sd22_2 163 189 - -
Accr9g01968 1008 SMART LRR_sd22_2 307 333 - -
Accr9g01968 1008 SMART LRR_sd22_2 555 587 - -
Accr9g01968 1008 Pfam Leucine rich repeat 431 471 IPR001611 GO:0005515
Accr9g01968 1008 Pfam Leucine rich repeat 533 592 IPR001611 GO:0005515
Accr9g01968 1008 ProSiteProfiles Protein kinase domain profile. 696 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01968 1008 Gene3D Ribonuclease Inhibitor 184 326 IPR032675 -
Accr9g01968 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 275 - -
Accr9g01968 1008 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Accr9g01968 1008 FunFam LRR receptor-like serine/threonine-protein kinase EFR 326 634 - -
Accr9g01968 1008 SMART serkin_6 696 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr9g01968 1008 SMART LRR_typ_2 386 409 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 235 259 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 459 482 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 434 458 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 91 115 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 260 284 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 507 531 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 555 578 IPR003591 -
Accr9g01968 1008 SMART LRR_typ_2 579 604 IPR003591 -
Accr9g01968 1008 SUPERFAMILY L domain-like 24 320 - -
Accr9g01968 1008 Gene3D Phosphorylase Kinase; domain 1 678 776 - -
Accr9g01968 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01968 Accr-Chr9 42759372 42763066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01968 23 1006 Receptor kinase-like Gene Family AT3G47570 46.146 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Accr9g01968 Pkinase 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01968 - - gmx:100792724 1127.46