Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01948 ATGTTATTATCTCATCGATATTCTAAGGTTGCAACAACAATATTATTCGTTGTTGCTCAAATATGGTTGACGGTGAATTCATTTTCAGAAGAAGATGAGATACACAGCTTGCCGGGACAACCTCCGGCAGAATTCCGGCAATATGGCGGTTATATTACAGTTGACGATGAGAATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGGAGACTACATGTCCAAGCCTCTAGTTCTCTGGTTGGAGGGAGGGCCTGGTACTTCTTCCGTTGGAGCCGGAGCTTTCGTGGAACATGGTGCTTTCAAGTTGAGAGAAAACGCTCTTGTGAAAAATGATTATAGTTGGAACAAAGAGGCAAATATGCTTTACTTGGAATTCCCTGCTGGAGTTGGTTTCTCCTACTCTTCTAATCAATCTTTCTATGGCTCTGTCAACGATGAAATTACAGCAAGGGATAATCTTGTCTTCCTACAGCGTTGGTTCAATAAATTCCCAGAATACAAGAACAATGCTTTCTTCATTGCTGGAGAGAGCTATGGCGGTCACTTTGTCCCTCAACTAGCACAACTCATCATTCACACCAAGACTCAGTTCAATCTGAAAGGGATTGCAGTAGGGAATCCACTTCTAGAATTTAGTACTGATTTCAACTCAGTAGGAGAATTTTTGTGGTCCCATGGGCTGATATCAGATTCAACTCACCAAAGCTTGACCACTGCATGCAACTTTTCCCAAATCACGAGGCAAAATCTGATAAATAAAACTCTCACACCGGTTTGCAAAGGAGTGTATACACAAATGTCACAAGAGGCTGGTGACTATCTAGGCGTTGTCTCTCCATGCTTGTCAACAATCTCTGAAGTTAGCCAACTGCTTAAGAAGAGTCAAGAAATAGACAATTACTTAAACCGGAAAGATGTACAAGAAGCTCTTCATGCTAAGCTTATAGGAGTCACCAAGTGGTCCATTAATGGCCGGGAAGTTATTAAATATGATATTCAGAATGCTGAGATACCAATAATTCCTATCCTCAAGGAACTAGTTGAGTCAGGTCTCCAAGTACTGGTATACAGTGGAGATCAAGATGCAGGGATTCCCCTGACTGGAACACGAATGCTGGTGGATGAATTGGCCAAGGAGATGGCACTGAATCCAACTGTGCCCTATAGAAGCTGGTTTCAGGGAAGACAGGTTGCAGGATGGACACAAGTGTATGGTAACAACATTCTATCATTCGTAACAATAAGAGGAGGAGTTCATTTGACTTCAGTTTCACAGCCTGAAAGATATTTGCTGGTGCTTCAAGCTTTCCTGCAAGGAAAGCCCCTTCTCCATAAATAA 1344 0.4196 MLLSHRYSKVATTILFVVAQIWLTVNSFSEEDEIHSLPGQPPAEFRQYGGYITVDDENQRALFYYFVEAEGDYMSKPLVLWLEGGPGTSSVGAGAFVEHGAFKLRENALVKNDYSWNKEANMLYLEFPAGVGFSYSSNQSFYGSVNDEITARDNLVFLQRWFNKFPEYKNNAFFIAGESYGGHFVPQLAQLIIHTKTQFNLKGIAVGNPLLEFSTDFNSVGEFLWSHGLISDSTHQSLTTACNFSQITRQNLINKTLTPVCKGVYTQMSQEAGDYLGVVSPCLSTISEVSQLLKKSQEIDNYLNRKDVQEALHAKLIGVTKWSINGREVIKYDIQNAEIPIIPILKELVESGLQVLVYSGDQDAGIPLTGTRMLVDELAKEMALNPTVPYRSWFQGRQVAGWTQVYGNNILSFVTIRGGVHLTSVSQPERYLLVLQAFLQGKPLLHK 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01948 447 SUPERFAMILY alpha/beta-Hydrolases 34 444 IPR029058 -
Accr9g01948 447 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Accr9g01948 447 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 423 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 FunFam Carboxypeptidase 27 445 - -
Accr9g01948 447 Pfam Serine carboxypeptidase 39 441 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Accr9g01948 447 Gene3D alpha/beta hydrolase 27 445 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01948 Accr-Chr9 42205055 42209542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01948 302 444 Calmodulin-binding Proteins AT2G22960 30.070 1.40e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01948 K16297 - gmx:100805028 573.163