Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr9g01947 ATGGAATTTTGGGGCATCGAAAGGCAAAAGCATATTCTTCAAGATGTCATTGTCGATATATACACCTTATCTCTAATAAGTCTCATATCTTCATCTCCCATTAGCAGTCACAGAGAAGAAGAACAAAGTAAACCTTCATATCTTACGATGTTATTATCTCATCGATATTCTAAGGTTGCAACAACAATATTATTCGTTGTTGCTCAAATATGGTTGACGGTGAATTCATTTTCAGAAGAAGATGAGATACACAGCTTGCCGGGACAACCTCCGGCAGAATTCCGGCAATATGGCGGTTATATTACAGTTGACGATGAGAATCAAAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGGAGACTACATGTCCAAGCCTCTAGTTCTCTGGTTGGAGGGAGGGCCTGGTACTTCTTCCGTTGGAGCCGGAGCTTTCGTGGAACATGGTGCTTTCAAGTTGAGAGAAAACGCTCTTGTGAAAAATGATTATAGTTGGAACAAAGAGGCAAATATGCTTTACTTGGAATTCCCTGCTGGAGTTGGTTTCTCCTACTCTTCTAATCAATCTTTCTATGGCTCTGTCAACGATGAAATTACAGCAAGGGATAATCTTGTCTTCCTACAGCGTTGGTTCAATAAATTCCCAGAATACAAGAACAATGCTTTCTTCATTGCTGGAGAGAGCTATGGCGGTCACTTTGTCCCTCAACTAGCACAACTCATCATTCACACCAAGACTCAGTTCAATCTGAAAGGGATTGCAGTAGGGAATCCACTTCTAGAATTTAGTACTGATTTCAACTCAGTAGGAGAATTTTTGTGGTCCCATGGGCTGATATCAGATTCAACTCACCAAAGCTTGACCACTGCATGCAACTTTTCCCAAATCACGAGGCAAAATCTGATAAATAAAACTCTCACACCGGTTTGCAAAGGAGTGTATACACAAATGTCACAAGAGGCTGGTGACTATCTAGGCGTTGTCTCTCCATGCTTGTCAACAATCTCTGAAGTTAGCCAACTGCTTAAGAAGAGTCAAGAAATAGACAATTACTTAAACCGGAAAGATGTACAAGAAGCTCTTCATGCTAAGCTTATAGGAGTCACCAAGTGGTCCATTAATGGCCGGGAAGTTATTAAATATGATATTCAGAATGCTGAGATACCAATAATTCCTATCCTCAAGGAACTAGTTGAGTCAGGTCTCCAAGTACTGGTATACAGTGGAGATCAAGATGCAGGGATTCCCCTGACTGGAACACGAATGCTGGTGGATGAATTGGCCAAGGAGATGGCACTGAATCCAACTGTGCCCTATAGAAGCTGGTTTCAGGGAAGACAGGTTGCAGGATGGACACAAGTGTATGGTAACAACATTCTATCATTCGTAACAATAAGAGGAGGAGTTCATTTGACTTCAGTTTCACAGCCTGAAAGATATTTGCTGGTGCTTCAAGCTTTCCTGCAAGGAAAGCCCCTTCTCCATAAATAA 1491 0.4138 MEFWGIERQKHILQDVIVDIYTLSLISLISSSPISSHREEEQSKPSYLTMLLSHRYSKVATTILFVVAQIWLTVNSFSEEDEIHSLPGQPPAEFRQYGGYITVDDENQRALFYYFVEAEGDYMSKPLVLWLEGGPGTSSVGAGAFVEHGAFKLRENALVKNDYSWNKEANMLYLEFPAGVGFSYSSNQSFYGSVNDEITARDNLVFLQRWFNKFPEYKNNAFFIAGESYGGHFVPQLAQLIIHTKTQFNLKGIAVGNPLLEFSTDFNSVGEFLWSHGLISDSTHQSLTTACNFSQITRQNLINKTLTPVCKGVYTQMSQEAGDYLGVVSPCLSTISEVSQLLKKSQEIDNYLNRKDVQEALHAKLIGVTKWSINGREVIKYDIQNAEIPIIPILKELVESGLQVLVYSGDQDAGIPLTGTRMLVDELAKEMALNPTVPYRSWFQGRQVAGWTQVYGNNILSFVTIRGGVHLTSVSQPERYLLVLQAFLQGKPLLHK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr9g01947 496 Pfam Serine carboxypeptidase 88 490 IPR001563 GO:0004185|GO:0006508
Accr9g01947 496 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Accr9g01947 496 FunFam Carboxypeptidase 76 494 - -
Accr9g01947 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Accr9g01947 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 173 IPR001563 GO:0004185|GO:0006508
Accr9g01947 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 460 473 IPR001563 GO:0004185|GO:0006508
Accr9g01947 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 184 IPR001563 GO:0004185|GO:0006508
Accr9g01947 496 Gene3D alpha/beta hydrolase 76 494 IPR029058 -
Accr9g01947 496 SUPERFAMILY alpha/beta-Hydrolases 83 493 IPR029058 -
Accr9g01947 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 472 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr9g01947 Accr-Chr9 42204908 42209542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr9g01947 351 493 Calmodulin-binding Proteins AT2G22960 30.070 1.67e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr9g01947 K16297 - gmx:100805028 573.163